| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183861
Identifier: 189183861
GI number: 189183861
Start: 997773
End: 997991
Strand: Direct
Name: 189183861
Synonym: OTT_0954
Alternate gene names: NA
Gene position: 997773-997991 (Clockwise)
Preceding gene: 189183860
Following gene: 189183862
Centisome position: 49.67
GC content: 32.42
Gene sequence:
>219_bases ATGAAATTCGAACAGATTAAAGAGTTAAAAGATGAAAAATTTCGTCTATTAACAGGAGTAAGGAAGGGAACATTTTCAAA GATGGCGGATATTTTAAGTAAAGCTGATGGTCTTAAGAAATCAAAAGGTGGGCGTAAAAATAAGCTTAATTTGGAGGAAC AGTTGCTGATGGCCTTAGAATACCTTAGAGAATACTATACTTATTTCTATATAGGTTAG
Upstream 100 bases:
>100_bases TCTATGACTGGCACTATCGTAGTTACAAACAATAATAGACTTCTTTCGAAACTAGAGAATGATGTAGAATAGTGTTATAA AGATCTGATTTGAGGTAATA
Downstream 100 bases:
>100_bases AACTATGGGATTAGTGAAAGTTGAGCATATAAAGCTGTAAAATTGGTAGAAGACCCCCTAGTTAAACACCAAAACTTTGC TCTTCCAGGTCGTAAAGCTA
Product: transposase
Products: NA
Alternate protein names: Preprotein Translocase SecY; ISRin1 Transposase OrfA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MKFEQIKELKDEKFRLLTGVRKGTFSKMADILSKADGLKKSKGGRKNKLNLEEQLLMALEYLREYYTYFYIG
Sequences:
>Translated_72_residues MKFEQIKELKDEKFRLLTGVRKGTFSKMADILSKADGLKKSKGGRKNKLNLEEQLLMALEYLREYYTYFYIG >Mature_72_residues MKFEQIKELKDEKFRLLTGVRKGTFSKMADILSKADGLKKSKGGRKNKLNLEEQLLMALEYLREYYTYFYIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8516; Mature: 8516
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFEQIKELKDEKFRLLTGVRKGTFSKMADILSKADGLKKSKGGRKNKLNLEEQLLMALE CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH YLREYYTYFYIG HHHHHHHHHHCC >Mature Secondary Structure MKFEQIKELKDEKFRLLTGVRKGTFSKMADILSKADGLKKSKGGRKNKLNLEEQLLMALE CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH YLREYYTYFYIG HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA