Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183842

Identifier: 189183842

GI number: 189183842

Start: 976388

End: 976582

Strand: Direct

Name: 189183842

Synonym: OTT_0935

Alternate gene names: NA

Gene position: 976388-976582 (Clockwise)

Preceding gene: 189183841

Following gene: 189183843

Centisome position: 48.6

GC content: 32.82

Gene sequence:

>195_bases
ATGGCGAAAGGAATAGATCCAAGAGAAGTAAAACGTCAACAACAGATAGAAGAAAATGAAAAACGTCTAAAAGCAAGACA
AGATATTACATTCAAACAGCTGTGTGATAAGTGTGAAGAGTATAGCAAAATATATAATACAAGCTCGAAGGGTAGTACTG
CAAGAATACATAATTATGGGAAACCGTTATTTTAA

Upstream 100 bases:

>100_bases
ACAAAAATTTAAAAACCAGAGTTTAAAAATAACGATAGGTGTATTTCCAGATTTATCTATTAAAGAAGCTAGAAAAATAG
CAAGAGAATTAAAGACATTA

Downstream 100 bases:

>100_bases
AAAAAGATAAACGATGTTAAAAGGAATGATATTGAACCAATATTCAATGATATCAGCAAAGAGGAGAAATATGCTACAGC
AAATCTATTTCTAATAACCT

Product: putative integrase

Products: NA

Alternate protein names: Phage-Related Integrase

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MAKGIDPREVKRQQQIEENEKRLKARQDITFKQLCDKCEEYSKIYNTSSKGSTARIHNYGKPLF

Sequences:

>Translated_64_residues
MAKGIDPREVKRQQQIEENEKRLKARQDITFKQLCDKCEEYSKIYNTSSKGSTARIHNYGKPLF
>Mature_63_residues
AKGIDPREVKRQQQIEENEKRLKARQDITFKQLCDKCEEYSKIYNTSSKGSTARIHNYGKPLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7549; Mature: 7417

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGIDPREVKRQQQIEENEKRLKARQDITFKQLCDKCEEYSKIYNTSSKGSTARIHNYG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC
KPLF
CCCC
>Mature Secondary Structure 
AKGIDPREVKRQQQIEENEKRLKARQDITFKQLCDKCEEYSKIYNTSSKGSTARIHNYG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC
KPLF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA