Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183838

Identifier: 189183838

GI number: 189183838

Start: 970459

End: 971205

Strand: Direct

Name: 189183838

Synonym: OTT_0931

Alternate gene names: NA

Gene position: 970459-971205 (Clockwise)

Preceding gene: 189183837

Following gene: 189183839

Centisome position: 48.31

GC content: 24.77

Gene sequence:

>747_bases
ATGAACGATAATGATATTGACCTTGTTAAAAAATTTTGTCTTTATACTTTATCAAATGACAGTGCTAAAATGCAACTATT
GCTTTTCAGTGAATTTGAGAAACAATTGTTGTCAATTATAGCTAATAGTAAAACTGCTTTTTCTGGATTAATAAAACTTA
GTTGGTTTTACGAACAAATACAGATATCTAAGCATAAAAAGTCGTATCTTGGCAATAAATTAATGAATAATATTAATGAA
ATATATGATCATAACCAAAAAATCATATTATTAGACTTTGTTCGGTTATTTGATTTAGTAGTAGAAAGAAAAATTTTTGA
TTCACTAGAAGAGTTAAATAATCAAATATTATTGCCACTAGCTAGTATTTATACAAAATTTTTTTTAACTTTAGAGCCTA
AAATTGATGCATATTTAAGCATCAGGCAAGTATTTTATATTTATGCAGCACTAGTTTTTATAAGGTTACAAAAATATTTC
ATTTTTCACCAATGGTATTGCTTTGGTCAGAATTTTAATTCTGACCTTTATGATACATACTTTAACAACCTAATTACAAA
GTTATATTCTATACATAAATTACATAATTACAGCTTCAAATTACCAAAGTTGTTAAAATTTTTACTAAAAGCGAATAAGA
TTTATCTTATTCATTACTTACTGCATATTAGGAAGTATGGCTATAACTGTCCTGATATTAACCAAGGTATTGTTAGAATA
AAATTAGCTTTAGCTGTTATATTCTAA

Upstream 100 bases:

>100_bases
ATTTATATAATGCTATTTTAAAGCTTGCTACAGTTAAAGAATAATCGTATCAAATATATGCTAAGGCAAATTTATTGTTG
CCAATTAGGCAATTGCTATC

Downstream 100 bases:

>100_bases
GTTCTAGAGATCTAATAGCATTTTCTAGTTATAATAGACTTCTTTCGAAACTAGACAATGATGTAGAATGGTGTTATAAA
AATCTGATTTGAAGTAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MNDNDIDLVKKFCLYTLSNDSAKMQLLLFSEFEKQLLSIIANSKTAFSGLIKLSWFYEQIQISKHKKSYLGNKLMNNINE
IYDHNQKIILLDFVRLFDLVVERKIFDSLEELNNQILLPLASIYTKFFLTLEPKIDAYLSIRQVFYIYAALVFIRLQKYF
IFHQWYCFGQNFNSDLYDTYFNNLITKLYSIHKLHNYSFKLPKLLKFLLKANKIYLIHYLLHIRKYGYNCPDINQGIVRI
KLALAVIF

Sequences:

>Translated_248_residues
MNDNDIDLVKKFCLYTLSNDSAKMQLLLFSEFEKQLLSIIANSKTAFSGLIKLSWFYEQIQISKHKKSYLGNKLMNNINE
IYDHNQKIILLDFVRLFDLVVERKIFDSLEELNNQILLPLASIYTKFFLTLEPKIDAYLSIRQVFYIYAALVFIRLQKYF
IFHQWYCFGQNFNSDLYDTYFNNLITKLYSIHKLHNYSFKLPKLLKFLLKANKIYLIHYLLHIRKYGYNCPDINQGIVRI
KLALAVIF
>Mature_248_residues
MNDNDIDLVKKFCLYTLSNDSAKMQLLLFSEFEKQLLSIIANSKTAFSGLIKLSWFYEQIQISKHKKSYLGNKLMNNINE
IYDHNQKIILLDFVRLFDLVVERKIFDSLEELNNQILLPLASIYTKFFLTLEPKIDAYLSIRQVFYIYAALVFIRLQKYF
IFHQWYCFGQNFNSDLYDTYFNNLITKLYSIHKLHNYSFKLPKLLKFLLKANKIYLIHYLLHIRKYGYNCPDINQGIVRI
KLALAVIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29611; Mature: 29611

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCC
>Mature Secondary Structure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HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA