| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183838
Identifier: 189183838
GI number: 189183838
Start: 970459
End: 971205
Strand: Direct
Name: 189183838
Synonym: OTT_0931
Alternate gene names: NA
Gene position: 970459-971205 (Clockwise)
Preceding gene: 189183837
Following gene: 189183839
Centisome position: 48.31
GC content: 24.77
Gene sequence:
>747_bases ATGAACGATAATGATATTGACCTTGTTAAAAAATTTTGTCTTTATACTTTATCAAATGACAGTGCTAAAATGCAACTATT GCTTTTCAGTGAATTTGAGAAACAATTGTTGTCAATTATAGCTAATAGTAAAACTGCTTTTTCTGGATTAATAAAACTTA GTTGGTTTTACGAACAAATACAGATATCTAAGCATAAAAAGTCGTATCTTGGCAATAAATTAATGAATAATATTAATGAA ATATATGATCATAACCAAAAAATCATATTATTAGACTTTGTTCGGTTATTTGATTTAGTAGTAGAAAGAAAAATTTTTGA TTCACTAGAAGAGTTAAATAATCAAATATTATTGCCACTAGCTAGTATTTATACAAAATTTTTTTTAACTTTAGAGCCTA AAATTGATGCATATTTAAGCATCAGGCAAGTATTTTATATTTATGCAGCACTAGTTTTTATAAGGTTACAAAAATATTTC ATTTTTCACCAATGGTATTGCTTTGGTCAGAATTTTAATTCTGACCTTTATGATACATACTTTAACAACCTAATTACAAA GTTATATTCTATACATAAATTACATAATTACAGCTTCAAATTACCAAAGTTGTTAAAATTTTTACTAAAAGCGAATAAGA TTTATCTTATTCATTACTTACTGCATATTAGGAAGTATGGCTATAACTGTCCTGATATTAACCAAGGTATTGTTAGAATA AAATTAGCTTTAGCTGTTATATTCTAA
Upstream 100 bases:
>100_bases ATTTATATAATGCTATTTTAAAGCTTGCTACAGTTAAAGAATAATCGTATCAAATATATGCTAAGGCAAATTTATTGTTG CCAATTAGGCAATTGCTATC
Downstream 100 bases:
>100_bases GTTCTAGAGATCTAATAGCATTTTCTAGTTATAATAGACTTCTTTCGAAACTAGACAATGATGTAGAATGGTGTTATAAA AATCTGATTTGAAGTAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MNDNDIDLVKKFCLYTLSNDSAKMQLLLFSEFEKQLLSIIANSKTAFSGLIKLSWFYEQIQISKHKKSYLGNKLMNNINE IYDHNQKIILLDFVRLFDLVVERKIFDSLEELNNQILLPLASIYTKFFLTLEPKIDAYLSIRQVFYIYAALVFIRLQKYF IFHQWYCFGQNFNSDLYDTYFNNLITKLYSIHKLHNYSFKLPKLLKFLLKANKIYLIHYLLHIRKYGYNCPDINQGIVRI KLALAVIF
Sequences:
>Translated_248_residues MNDNDIDLVKKFCLYTLSNDSAKMQLLLFSEFEKQLLSIIANSKTAFSGLIKLSWFYEQIQISKHKKSYLGNKLMNNINE IYDHNQKIILLDFVRLFDLVVERKIFDSLEELNNQILLPLASIYTKFFLTLEPKIDAYLSIRQVFYIYAALVFIRLQKYF IFHQWYCFGQNFNSDLYDTYFNNLITKLYSIHKLHNYSFKLPKLLKFLLKANKIYLIHYLLHIRKYGYNCPDINQGIVRI KLALAVIF >Mature_248_residues MNDNDIDLVKKFCLYTLSNDSAKMQLLLFSEFEKQLLSIIANSKTAFSGLIKLSWFYEQIQISKHKKSYLGNKLMNNINE IYDHNQKIILLDFVRLFDLVVERKIFDSLEELNNQILLPLASIYTKFFLTLEPKIDAYLSIRQVFYIYAALVFIRLQKYF IFHQWYCFGQNFNSDLYDTYFNNLITKLYSIHKLHNYSFKLPKLLKFLLKANKIYLIHYLLHIRKYGYNCPDINQGIVRI KLALAVIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29611; Mature: 29611
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDNDIDLVKKFCLYTLSNDSAKMQLLLFSEFEKQLLSIIANSKTAFSGLIKLSWFYEQI CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QISKHKKSYLGNKLMNNINEIYDHNQKIILLDFVRLFDLVVERKIFDSLEELNNQILLPL HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHH ASIYTKFFLTLEPKIDAYLSIRQVFYIYAALVFIRLQKYFIFHQWYCFGQNFNSDLYDTY HHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHH FNNLITKLYSIHKLHNYSFKLPKLLKFLLKANKIYLIHYLLHIRKYGYNCPDINQGIVRI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH KLALAVIF HHHHHHCC >Mature Secondary Structure MNDNDIDLVKKFCLYTLSNDSAKMQLLLFSEFEKQLLSIIANSKTAFSGLIKLSWFYEQI CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QISKHKKSYLGNKLMNNINEIYDHNQKIILLDFVRLFDLVVERKIFDSLEELNNQILLPL HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHH ASIYTKFFLTLEPKIDAYLSIRQVFYIYAALVFIRLQKYFIFHQWYCFGQNFNSDLYDTY HHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHH FNNLITKLYSIHKLHNYSFKLPKLLKFLLKANKIYLIHYLLHIRKYGYNCPDINQGIVRI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH KLALAVIF HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA