| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183801
Identifier: 189183801
GI number: 189183801
Start: 935892
End: 937490
Strand: Direct
Name: 189183801
Synonym: OTT_0894
Alternate gene names: NA
Gene position: 935892-937490 (Clockwise)
Preceding gene: 189183800
Following gene: 189183814
Centisome position: 46.59
GC content: 26.39
Gene sequence:
>1599_bases ATGATTACTAAACAAATATCGCAAAAAAGATACTTCGGAAAATTAATTACTAAGCAAGCTATGAAAGTAGAATCACAAGA AAATTTGCAAACTGCAACATTATTATCAAAAATGGATGTATGCATAGAAAAAGTTGATCAAGAATTATTTAGGGCAGAGC AAATAATAAAAAAGCAAGATATAAGGTTGCAAAAACTAAAATTAATACACAAGACATTAGATAATCTTGAGTATAATTAC CAACAAAAAATTCTCAAATCTTATGGGATGCAAGGTTTAGATAGTAACAAGAAAGATCTATTGATGATAGATGATTCTAA ATTACTAAATAATCATGTTAAAGATGAGTTAAGTAAATTAATTAATGTGAAAGGAAAAAAAATAGAATGGCAGAAAACTT GGCAAACATTATTATCAAAAATTGATGCTTGCATAGAAAAAATTGATCAAGAATTATCTAATGCAGAGCAAATAATAAAA GAGCAAGATATAAGGTTACACCAACTAAAATCAATACACAAGGCATTAGATAATCTTGAGCATAATTATAAACAAAAAAT ATACCTAAAAGATGCTAATGCTTTTATTTCTGAACAGAAAGAAAATTATTTTGTACATTTAATATTAAAAAAATTAGAAA CACATAGATCAACTCTTGATACTGCTTTACAGATTTTGACAAGCAACAAACTAAGCTCAGAAAATCGAGATATAAAAATT AGAGATTTACTTGATACTACATATAAAGCAGAAAATGTAAATAACTTAGAGGTAATACTTTGTGATACATTTAATATTAT ACATAAGGTAAAAAAGTTAATAGACAACACTAGTAAAACCAAAGATGGTGATGCTATTTTAGCACAACATGTACTTGAGA TATTTGAGAAAATTGTTGCTAATCTGCAAAGTAATCAAATTATTTTAGATTATGCAAAACAAAATCTAGGAAAGAGTTAT TTAAAGTTATTTTCTGAAGATAAAAAAGTAGATTTAAATTGTAGTTTAGAAAGTACGAAAGCTCAAAATACAGAAGATGT TCCTATCTTAAATAGTAAAACTGAAAAACTTGTTAATAAAAATGAAGAGATAGCAGATAATGAAATAATACATAAAAATT CCTCAGCATATCTGCAAATATATAATTCAGACTTGAAAGAGATAAAAAGTATAATGCGTGATATAAAAGAGATAGCAGAA ACAGAATATTCAAATGATGAGTATAATAATGCTATTAAAAGAGCAGCAATAGAACAAATTGATACTTGCATTAGTAAATG TGACACTATTTGCAATCCTGAAAAGGAAAATCAAAATTCTGATGGCGAAATTACGCTCGAAGAGTGGAAAAAAATGACAG AATGTACAAAAGAGAATAGCAAAACCGAGCAAAATAATCTTAATGAACACACAACTTTCTTTGATAAAGCTAAAGAAGCA GTTGTAACAGTTGCTTCTTCGTTTTTTAAACTATTTTTACCTATAGAAGTAAACAATAAAAATTCTGTTCATGAAACACA AGATCTAGATATTTCAAGTAGTTTTGAATTATTAGATATAAATGAAAACGATACAGAAGCTATAGGAGAAGTTCTATAG
Upstream 100 bases:
>100_bases GTACTCATTAACTAAGTATTGCAAAACGATTTATTTTGTGCTTAATTGATAGGAAGTATATTTTTATTAATTAAATTGAA ATGATTTTTAAGGAAAAAAC
Downstream 100 bases:
>100_bases CTTCGTCTGTTTTTTAATAGTTTGGCTATCATTATGACCTAGCTATGCTTTTTGAAAAGTATATAATATAACTGTTTTAT AGTAGCTTAGCTATAGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MITKQISQKRYFGKLITKQAMKVESQENLQTATLLSKMDVCIEKVDQELFRAEQIIKKQDIRLQKLKLIHKTLDNLEYNY QQKILKSYGMQGLDSNKKDLLMIDDSKLLNNHVKDELSKLINVKGKKIEWQKTWQTLLSKIDACIEKIDQELSNAEQIIK EQDIRLHQLKSIHKALDNLEHNYKQKIYLKDANAFISEQKENYFVHLILKKLETHRSTLDTALQILTSNKLSSENRDIKI RDLLDTTYKAENVNNLEVILCDTFNIIHKVKKLIDNTSKTKDGDAILAQHVLEIFEKIVANLQSNQIILDYAKQNLGKSY LKLFSEDKKVDLNCSLESTKAQNTEDVPILNSKTEKLVNKNEEIADNEIIHKNSSAYLQIYNSDLKEIKSIMRDIKEIAE TEYSNDEYNNAIKRAAIEQIDTCISKCDTICNPEKENQNSDGEITLEEWKKMTECTKENSKTEQNNLNEHTTFFDKAKEA VVTVASSFFKLFLPIEVNNKNSVHETQDLDISSSFELLDINENDTEAIGEVL
Sequences:
>Translated_532_residues MITKQISQKRYFGKLITKQAMKVESQENLQTATLLSKMDVCIEKVDQELFRAEQIIKKQDIRLQKLKLIHKTLDNLEYNY QQKILKSYGMQGLDSNKKDLLMIDDSKLLNNHVKDELSKLINVKGKKIEWQKTWQTLLSKIDACIEKIDQELSNAEQIIK EQDIRLHQLKSIHKALDNLEHNYKQKIYLKDANAFISEQKENYFVHLILKKLETHRSTLDTALQILTSNKLSSENRDIKI RDLLDTTYKAENVNNLEVILCDTFNIIHKVKKLIDNTSKTKDGDAILAQHVLEIFEKIVANLQSNQIILDYAKQNLGKSY LKLFSEDKKVDLNCSLESTKAQNTEDVPILNSKTEKLVNKNEEIADNEIIHKNSSAYLQIYNSDLKEIKSIMRDIKEIAE TEYSNDEYNNAIKRAAIEQIDTCISKCDTICNPEKENQNSDGEITLEEWKKMTECTKENSKTEQNNLNEHTTFFDKAKEA VVTVASSFFKLFLPIEVNNKNSVHETQDLDISSSFELLDINENDTEAIGEVL >Mature_532_residues MITKQISQKRYFGKLITKQAMKVESQENLQTATLLSKMDVCIEKVDQELFRAEQIIKKQDIRLQKLKLIHKTLDNLEYNY QQKILKSYGMQGLDSNKKDLLMIDDSKLLNNHVKDELSKLINVKGKKIEWQKTWQTLLSKIDACIEKIDQELSNAEQIIK EQDIRLHQLKSIHKALDNLEHNYKQKIYLKDANAFISEQKENYFVHLILKKLETHRSTLDTALQILTSNKLSSENRDIKI RDLLDTTYKAENVNNLEVILCDTFNIIHKVKKLIDNTSKTKDGDAILAQHVLEIFEKIVANLQSNQIILDYAKQNLGKSY LKLFSEDKKVDLNCSLESTKAQNTEDVPILNSKTEKLVNKNEEIADNEIIHKNSSAYLQIYNSDLKEIKSIMRDIKEIAE TEYSNDEYNNAIKRAAIEQIDTCISKCDTICNPEKENQNSDGEITLEEWKKMTECTKENSKTEQNNLNEHTTFFDKAKEA VVTVASSFFKLFLPIEVNNKNSVHETQDLDISSSFELLDINENDTEAIGEVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61544; Mature: 61544
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITKQISQKRYFGKLITKQAMKVESQENLQTATLLSKMDVCIEKVDQELFRAEQIIKKQD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IRLQKLKLIHKTLDNLEYNYQQKILKSYGMQGLDSNKKDLLMIDDSKLLNNHVKDELSKL CHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHH INVKGKKIEWQKTWQTLLSKIDACIEKIDQELSNAEQIIKEQDIRLHQLKSIHKALDNLE HCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH HNYKQKIYLKDANAFISEQKENYFVHLILKKLETHRSTLDTALQILTSNKLSSENRDIKI HHHHHEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEH RDLLDTTYKAENVNNLEVILCDTFNIIHKVKKLIDNTSKTKDGDAILAQHVLEIFEKIVA HHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH NLQSNQIILDYAKQNLGKSYLKLFSEDKKVDLNCSLESTKAQNTEDVPILNSKTEKLVNK CCCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCC NEEIADNEIIHKNSSAYLQIYNSDLKEIKSIMRDIKEIAETEYSNDEYNNAIKRAAIEQI CCCCCCCHHEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DTCISKCDTICNPEKENQNSDGEITLEEWKKMTECTKENSKTEQNNLNEHTTFFDKAKEA HHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHH VVTVASSFFKLFLPIEVNNKNSVHETQDLDISSSFELLDINENDTEAIGEVL HHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCC >Mature Secondary Structure MITKQISQKRYFGKLITKQAMKVESQENLQTATLLSKMDVCIEKVDQELFRAEQIIKKQD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IRLQKLKLIHKTLDNLEYNYQQKILKSYGMQGLDSNKKDLLMIDDSKLLNNHVKDELSKL CHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHH INVKGKKIEWQKTWQTLLSKIDACIEKIDQELSNAEQIIKEQDIRLHQLKSIHKALDNLE HCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH HNYKQKIYLKDANAFISEQKENYFVHLILKKLETHRSTLDTALQILTSNKLSSENRDIKI HHHHHEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEH RDLLDTTYKAENVNNLEVILCDTFNIIHKVKKLIDNTSKTKDGDAILAQHVLEIFEKIVA HHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH NLQSNQIILDYAKQNLGKSYLKLFSEDKKVDLNCSLESTKAQNTEDVPILNSKTEKLVNK CCCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCC NEEIADNEIIHKNSSAYLQIYNSDLKEIKSIMRDIKEIAETEYSNDEYNNAIKRAAIEQI CCCCCCCHHEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DTCISKCDTICNPEKENQNSDGEITLEEWKKMTECTKENSKTEQNNLNEHTTFFDKAKEA HHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHH VVTVASSFFKLFLPIEVNNKNSVHETQDLDISSSFELLDINENDTEAIGEVL HHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA