| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183794
Identifier: 189183794
GI number: 189183794
Start: 928484
End: 930148
Strand: Direct
Name: 189183794
Synonym: OTT_0887
Alternate gene names: NA
Gene position: 928484-930148 (Clockwise)
Preceding gene: 189183793
Following gene: 189183797
Centisome position: 46.22
GC content: 31.47
Gene sequence:
>1665_bases ATGCATCGTGGGAGCAGTACGCAATTTAATATCCAGGCAATGGGTAGCATCCAATTATGTAAGATGCTTAAAGATAGAGA TGTATTATCCAAACCTATTATAACAGAGATTTACAATAGAGCTTTGTTTTTACTGCAAACTGAAGATGCAAGATACAATA GAGTGCAGTTTGATGCTAGAGGCTTAGCAACAATTCTATATCAATTTGCAAAATTAAACTATGTTATAGGTTCTGAGTTT ATTGAGGCTTGGACAAATAAAGCTATAAATCTAATGGATGAGTTTAACCCTCAGGAGTTAGCTAATTCCATATGGGCATT TGGACGGTTAGAAATTCATCCATCAGATCAATTCATTCAGGCTTGGATACATCATGCTACTAAAACTATTGATAACTTTA ATACTCAAGGGTTAGCTAATTCCATATGGGCATTTGGACGGTTAGAAATTCATCCATCAGATCAATTCATTCAGGCTTGG ATACATCATGCTACTAAAACTATTGATAACTTTAATACTCAAGGGTTAGCTAATTCAATATTGGCATTAGGACAGTTAGA AATTCATCCATCAGATCAATTCATTCAGGCTTGGATACATCATGCTACTAAAACTATTGATAACTTTAATACTCAAAATT TAGCTAATTCCATATGGGCATTTGGACAGTTAGAAATTCATCCATCAGATCAATTCATTCAGGCTTGGATACATCATGCT ACTAAAACTATTGATAACTTTAATACTCAAAATTTAGCTAATTCCATATGGGCATTTGGACAGTTAGAAATTCATCCATC AGATCAATTCATTCAAGCTTGGATACATCATGCTACTAAAACTATTGATAACTTTAGTCTTCAAGAGTTAGCTAATTCTA TTTATGGAATATTCACATTAAATGTTTTATGTAACTCTAAAATTAAAGTACCACAGCAATTTATTTCTGCTGTTAATCAA AATATTGAACTGTTTGATGAAAATATTGAAGATATTGGTCAAATTTTAAAAGCGCATTATTATTTTGGTAAACAAGGTGT AGGAATATTAACTTCACAAAATCGTCAACTTCTTGAAAAAAAGTTTAAAACCAAATTAACACCTTGTCATACTTCAAATT TACAACTAAATGTTCTGAAGGTAGTCAAAAAAGTATTAGCACAACACACTGTTAAAAGCGAGTATCATATTAAGCAGATT ACTTCTAGTGTTGATATCTTTATTAAAGAGAAAAATACAGTAATTCAAGTAGATGGCCCATCACATTTTGATGACAATAA TGCTCCCAATTTTTCAACTAGGCTTAATACTGAATTATTGAAAAGTTATGGATACATAGTACATAGAATTCCATATTGGG TTTGGAATAAGTTAAAAACAAATATTGCCAAAGAAGAATATATATGTGAATTGATATGCACTGATGAATTTGTTTATCAA TCAGAGACGTTAGAGGAGGTGTTCTATGATGCACAAGAGAATATACCAGAGCAATCAACAAGCGAAATTTTACCTCATTC TGAATCACAGGTATCAGATGATGTATTTTATGATGCATACGAATATATTCCACAAGATCTATTAACACATGAATCTTCAT TCCATTATGACATGCAAGCATTAGGCAACATAGGTTCTTCTGATTTTGAGACACATAGTTTGTAA
Upstream 100 bases:
>100_bases AGAATGGCATGATATATATTATTCGATTAATGTATATTATACTCTTTAGTCAAAAGATATATTTAGTATTACACGTCAAC CTATATAAGGAGCTTAGAAC
Downstream 100 bases:
>100_bases CCCTTTTTACAAAAACTTAGCAAGCTTTTGATGCGAATGTATGCTAGAAAAATATGAGTTCTATATATAGCGGAAGGCAT AACTATAGTTACATTATAAT
Product: repeat-containing protein A_04
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MHRGSSTQFNIQAMGSIQLCKMLKDRDVLSKPIITEIYNRALFLLQTEDARYNRVQFDARGLATILYQFAKLNYVIGSEF IEAWTNKAINLMDEFNPQELANSIWAFGRLEIHPSDQFIQAWIHHATKTIDNFNTQGLANSIWAFGRLEIHPSDQFIQAW IHHATKTIDNFNTQGLANSILALGQLEIHPSDQFIQAWIHHATKTIDNFNTQNLANSIWAFGQLEIHPSDQFIQAWIHHA TKTIDNFNTQNLANSIWAFGQLEIHPSDQFIQAWIHHATKTIDNFSLQELANSIYGIFTLNVLCNSKIKVPQQFISAVNQ NIELFDENIEDIGQILKAHYYFGKQGVGILTSQNRQLLEKKFKTKLTPCHTSNLQLNVLKVVKKVLAQHTVKSEYHIKQI TSSVDIFIKEKNTVIQVDGPSHFDDNNAPNFSTRLNTELLKSYGYIVHRIPYWVWNKLKTNIAKEEYICELICTDEFVYQ SETLEEVFYDAQENIPEQSTSEILPHSESQVSDDVFYDAYEYIPQDLLTHESSFHYDMQALGNIGSSDFETHSL
Sequences:
>Translated_554_residues MHRGSSTQFNIQAMGSIQLCKMLKDRDVLSKPIITEIYNRALFLLQTEDARYNRVQFDARGLATILYQFAKLNYVIGSEF IEAWTNKAINLMDEFNPQELANSIWAFGRLEIHPSDQFIQAWIHHATKTIDNFNTQGLANSIWAFGRLEIHPSDQFIQAW IHHATKTIDNFNTQGLANSILALGQLEIHPSDQFIQAWIHHATKTIDNFNTQNLANSIWAFGQLEIHPSDQFIQAWIHHA TKTIDNFNTQNLANSIWAFGQLEIHPSDQFIQAWIHHATKTIDNFSLQELANSIYGIFTLNVLCNSKIKVPQQFISAVNQ NIELFDENIEDIGQILKAHYYFGKQGVGILTSQNRQLLEKKFKTKLTPCHTSNLQLNVLKVVKKVLAQHTVKSEYHIKQI TSSVDIFIKEKNTVIQVDGPSHFDDNNAPNFSTRLNTELLKSYGYIVHRIPYWVWNKLKTNIAKEEYICELICTDEFVYQ SETLEEVFYDAQENIPEQSTSEILPHSESQVSDDVFYDAYEYIPQDLLTHESSFHYDMQALGNIGSSDFETHSL >Mature_554_residues MHRGSSTQFNIQAMGSIQLCKMLKDRDVLSKPIITEIYNRALFLLQTEDARYNRVQFDARGLATILYQFAKLNYVIGSEF IEAWTNKAINLMDEFNPQELANSIWAFGRLEIHPSDQFIQAWIHHATKTIDNFNTQGLANSIWAFGRLEIHPSDQFIQAW IHHATKTIDNFNTQGLANSILALGQLEIHPSDQFIQAWIHHATKTIDNFNTQNLANSIWAFGQLEIHPSDQFIQAWIHHA TKTIDNFNTQNLANSIWAFGQLEIHPSDQFIQAWIHHATKTIDNFSLQELANSIYGIFTLNVLCNSKIKVPQQFISAVNQ NIELFDENIEDIGQILKAHYYFGKQGVGILTSQNRQLLEKKFKTKLTPCHTSNLQLNVLKVVKKVLAQHTVKSEYHIKQI TSSVDIFIKEKNTVIQVDGPSHFDDNNAPNFSTRLNTELLKSYGYIVHRIPYWVWNKLKTNIAKEEYICELICTDEFVYQ SETLEEVFYDAQENIPEQSTSEILPHSESQVSDDVFYDAYEYIPQDLLTHESSFHYDMQALGNIGSSDFETHSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63803; Mature: 63803
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRGSSTQFNIQAMGSIQLCKMLKDRDVLSKPIITEIYNRALFLLQTEDARYNRVQFDAR CCCCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHCEEEEEEECCCCCCEEEECHH GLATILYQFAKLNYVIGSEFIEAWTNKAINLMDEFNPQELANSIWAFGRLEIHPSDQFIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEECCCHHHHH AWIHHATKTIDNFNTQGLANSIWAFGRLEIHPSDQFIQAWIHHATKTIDNFNTQGLANSI HHHHHHHHHHHCCCCCCHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHH LALGQLEIHPSDQFIQAWIHHATKTIDNFNTQNLANSIWAFGQLEIHPSDQFIQAWIHHA HHHCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEECCCHHHHHHHHHHH TKTIDNFNTQNLANSIWAFGQLEIHPSDQFIQAWIHHATKTIDNFSLQELANSIYGIFTL HHHHHCCCHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH NVLCNSKIKVPQQFISAVNQNIELFDENIEDIGQILKAHYYFGKQGVGILTSQNRQLLEK HHHHCCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH KFKTKLTPCHTSNLQLNVLKVVKKVLAQHTVKSEYHIKQITSSVDIFIKEKNTVIQVDGP HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCEEEEECCC SHFDDNNAPNFSTRLNTELLKSYGYIVHRIPYWVWNKLKTNIAKEEYICELICTDEFVYQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH SETLEEVFYDAQENIPEQSTSEILPHSESQVSDDVFYDAYEYIPQDLLTHESSFHYDMQA HHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH LGNIGSSDFETHSL HCCCCCCCCCCCCC >Mature Secondary Structure MHRGSSTQFNIQAMGSIQLCKMLKDRDVLSKPIITEIYNRALFLLQTEDARYNRVQFDAR CCCCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHCEEEEEEECCCCCCEEEECHH GLATILYQFAKLNYVIGSEFIEAWTNKAINLMDEFNPQELANSIWAFGRLEIHPSDQFIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEECCCHHHHH AWIHHATKTIDNFNTQGLANSIWAFGRLEIHPSDQFIQAWIHHATKTIDNFNTQGLANSI HHHHHHHHHHHCCCCCCHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHH LALGQLEIHPSDQFIQAWIHHATKTIDNFNTQNLANSIWAFGQLEIHPSDQFIQAWIHHA HHHCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEECCCHHHHHHHHHHH TKTIDNFNTQNLANSIWAFGQLEIHPSDQFIQAWIHHATKTIDNFSLQELANSIYGIFTL HHHHHCCCHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH NVLCNSKIKVPQQFISAVNQNIELFDENIEDIGQILKAHYYFGKQGVGILTSQNRQLLEK HHHHCCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH KFKTKLTPCHTSNLQLNVLKVVKKVLAQHTVKSEYHIKQITSSVDIFIKEKNTVIQVDGP HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCEEEEECCC SHFDDNNAPNFSTRLNTELLKSYGYIVHRIPYWVWNKLKTNIAKEEYICELICTDEFVYQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH SETLEEVFYDAQENIPEQSTSEILPHSESQVSDDVFYDAYEYIPQDLLTHESSFHYDMQA HHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH LGNIGSSDFETHSL HCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA