| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
Click here to switch to the map view.
The map label for this gene is 189183792
Identifier: 189183792
GI number: 189183792
Start: 927056
End: 927292
Strand: Reverse
Name: 189183792
Synonym: OTT_0885
Alternate gene names: NA
Gene position: 927292-927056 (Counterclockwise)
Preceding gene: 189183795
Following gene: 189183791
Centisome position: 46.16
GC content: 30.8
Gene sequence:
>237_bases TTGCAGTTTGTAGTGCATAGCGTAGGAGCTGGCATTTCAAAAAACAAATTACAAGAGATGAACTCTGAATTAAAAAATCC ACACTTAATTAAGCATCAAGCATTAGATTCAGGGTTAGCATTTATCAAACATCTTACATATCAAATGAAAGGAAGCATTA AGATAGACAGTAAAGAAGGGCATTATACAAAGTTTTTAGTTAGCATTCCGATACAAACTAGTAATTTAAATTCATAA
Upstream 100 bases:
>100_bases TTGAATCTCTATTGAGATTATACCAGAAAACAGCTTGTAATGTTAGTGATAATAACGCTTACAAGACTTTTTATGCATAT CAGATTCAAAAGATAGAATA
Downstream 100 bases:
>100_bases CATCAGTCAAATGGAGAATATTATGAAAAATAAAAAAAAGAATATCAATACAACAAAAGACATTTCTCAAGATGTCTGGA CAATCCATATACCGCCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MQFVVHSVGAGISKNKLQEMNSELKNPHLIKHQALDSGLAFIKHLTYQMKGSIKIDSKEGHYTKFLVSIPIQTSNLNS
Sequences:
>Translated_78_residues MQFVVHSVGAGISKNKLQEMNSELKNPHLIKHQALDSGLAFIKHLTYQMKGSIKIDSKEGHYTKFLVSIPIQTSNLNS >Mature_78_residues MQFVVHSVGAGISKNKLQEMNSELKNPHLIKHQALDSGLAFIKHLTYQMKGSIKIDSKEGHYTKFLVSIPIQTSNLNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8721; Mature: 8721
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFVVHSVGAGISKNKLQEMNSELKNPHLIKHQALDSGLAFIKHLTYQMKGSIKIDSKEG CCEEEECCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCC HYTKFLVSIPIQTSNLNS CEEEEEEECCEECCCCCC >Mature Secondary Structure MQFVVHSVGAGISKNKLQEMNSELKNPHLIKHQALDSGLAFIKHLTYQMKGSIKIDSKEG CCEEEECCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCC HYTKFLVSIPIQTSNLNS CEEEEEEECCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA