| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183781
Identifier: 189183781
GI number: 189183781
Start: 917177
End: 918295
Strand: Reverse
Name: 189183781
Synonym: OTT_0874
Alternate gene names: NA
Gene position: 918295-917177 (Counterclockwise)
Preceding gene: 189183783
Following gene: 189183780
Centisome position: 45.71
GC content: 31.28
Gene sequence:
>1119_bases ATGCGAATGACCCTAATAACAATTATAGCAGAAGGCGCTGAAACAGCATTGAGCTTACAGCAAGCAGGCATTAAAGGTAA TATCATTGCTAGTGCAGGAATTTCGAATTTGAGAAATTATTCACCATTTCCTGGTGAAAAAATCATCATTGCAGCAGATA ATGATAGCAAAAATTCTATAACTAATAATACTGTAATTAAAGCTGCAAAAACGTTAGAAATGAAGGGAGCGATAACTTGT ATAGTCAAACCACCAGAAAATGGTGATTTTAATAATCTGTTGCAAAGTTGTGGATACCAGTCAATTAGAGACATTATAGA ACCTGAAATTACTAAACTGACTAAGGCAGTTGAAACAACCAAACTTACTCAAACAGAAAATAATAGTATAGAAAAACAAA ATAATATTACGAATGTTAAAGAATTGTATAATAAATCGTCATCTCTATACTACTTTAAACAAGAAGAGGAAGCTAAGGTG GAAACGATAGTAGTGAATAAATATCTAGAAAACCATACAGAAATTTATAGTGCAAAAATCTTTAACAATTCTAATTTAAG GGCAAATATGGTTTTTGATGAAGAGACTCAAAAATCCTGGCCTGCACTCACTATTTTTGTTAAAAATGAAGCAGGTGAAA TTACTGGAGCTAAGATATTAACTCTGAATTCAAAAACATGTAATAAAGCTGATGTAGCTGAAAAATCTGTTGGTACAATT AGTGGCTCATTTGCTGAAATTGCTCAACAAAATTCAAAATACTCACCTGTAACAATCATTACAAAGGATATTGAAACAGC GTTAACCATTAGGCAAGCTGGAGTTGAAGGAAAAATCTTATGTGCAATTGAAGCCGAAAATTTGCAAAACTATAATCCTG GCCCAAAAGAAAAGATCATTCTAGCAGTTAAAAATGACGTAAATACTGAAAAAGCTGAAAAAGTTCTAGAGGATAAGGAA GCAGTAGTCTGTACAGTCAAAAATGACTTTAATAATGTATTAAAAACTCAAGGATTATATGCTGTTAGAAATATTATCAG CCCTGAAATAAGAAAACTTAATGAAAAAATTGAATCAATACAAACTAATATACAACAAAGATTATGTCAGAAACACTAG
Upstream 100 bases:
>100_bases GCGATTATTCATACTATGAATAGTGTTAGCTAATATCTAAATTTTTAGAATAGATCCTTAGGTAAAATTAGCGGATCGTT CATAACAATCGCAAAGCGAA
Downstream 100 bases:
>100_bases GCAGAGTATGACACAGCATTTTTTATTTAAAAAACTATAGAGTGAAAAAATATGACAAAAAAATTAAAGCATGATTCATT GGCAAAGACAATCATGAGTG
Product: putative conjugative transfer protein TraI
Products: NA
Alternate protein names: Conjugative Transfer Protein TraI; Conjugal Transfer Protein TraA; MobA/MobL Family Protein
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MRMTLITIIAEGAETALSLQQAGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNSITNNTVIKAAKTLEMKGAITC IVKPPENGDFNNLLQSCGYQSIRDIIEPEITKLTKAVETTKLTQTENNSIEKQNNITNVKELYNKSSSLYYFKQEEEAKV ETIVVNKYLENHTEIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADVAEKSVGTI SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKE AVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQQRLCQKH
Sequences:
>Translated_372_residues MRMTLITIIAEGAETALSLQQAGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNSITNNTVIKAAKTLEMKGAITC IVKPPENGDFNNLLQSCGYQSIRDIIEPEITKLTKAVETTKLTQTENNSIEKQNNITNVKELYNKSSSLYYFKQEEEAKV ETIVVNKYLENHTEIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADVAEKSVGTI SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKE AVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQQRLCQKH >Mature_372_residues MRMTLITIIAEGAETALSLQQAGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNSITNNTVIKAAKTLEMKGAITC IVKPPENGDFNNLLQSCGYQSIRDIIEPEITKLTKAVETTKLTQTENNSIEKQNNITNVKELYNKSSSLYYFKQEEEAKV ETIVVNKYLENHTEIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADVAEKSVGTI SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKE AVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQQRLCQKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41209; Mature: 41209
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMTLITIIAEGAETALSLQQAGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNSI CCEEEEEEEECCHHHHHHHHHCCCCCCEEECCCHHHHCCCCCCCCCEEEEEECCCCCCCC TNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQSCGYQSIRDIIEPEITKLTKAVETT CCCHHHHHHHHEEECCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHH KLTQTENNSIEKQNNITNVKELYNKSSSLYYFKQEEEAKVETIVVNKYLENHTEIYSAKI HEECCCCCCCHHHCCCHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHHHHCCHHEEEEEE FNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADVAEKSVGTI ECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCC SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKII CCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEE LAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESI EEEECCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHH QTNIQQRLCQKH HHHHHHHHHHCC >Mature Secondary Structure MRMTLITIIAEGAETALSLQQAGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNSI CCEEEEEEEECCHHHHHHHHHCCCCCCEEECCCHHHHCCCCCCCCCEEEEEECCCCCCCC TNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQSCGYQSIRDIIEPEITKLTKAVETT CCCHHHHHHHHEEECCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHH KLTQTENNSIEKQNNITNVKELYNKSSSLYYFKQEEEAKVETIVVNKYLENHTEIYSAKI HEECCCCCCCHHHCCCHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHHHHCCHHEEEEEE FNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADVAEKSVGTI ECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCC SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKII CCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEE LAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESI EEEECCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHH QTNIQQRLCQKH HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA