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The map label for this gene is traN [H]

Identifier: 189183768

GI number: 189183768

Start: 908220

End: 908504

Strand: Reverse

Name: traN [H]

Synonym: OTT_0861

Alternate gene names: 189183768

Gene position: 908504-908220 (Counterclockwise)

Preceding gene: 189183771

Following gene: 189183767

Centisome position: 45.22

GC content: 34.39

Gene sequence:

>285_bases
ATGTTCTTAGCTAGAAAGTCTACTTATTGCTGCTTTCAGTCGAAACTTGCTAGAATTTTTCAGGAAGAAGCAAGAAAACA
GCTAAAATTGAACTTTGGAACACCTGAATGTCCAAAGTGTAGAGGCCTTACTGTTGAAGAATTACAAAAAGTTGATTTCA
CTAAAATCAATATGGACGAACTATTTGGTGATATACTCACTAAGGCTCAAAACAGCATGAACAAAGACATTATTGCAGGA
ATCAAAGATAAAGTTCATCGTATGCAACAAAGTCAGTCTAAATGA

Upstream 100 bases:

>100_bases
ATAAGTTAATAGTAGGTTATATAAAGTGTAGAAGTTAATAAAAAATTAACATTTTTCCTTCTTTATATTTGATACGTCTT
TGCAGCTTTATTATCAGGCA

Downstream 100 bases:

>100_bases
GCAGATTACTAATGGTTATGATATTAATTAGTCAATTATCTACAGTTGATGCTTCGCCCACAGGATTTCTATGGTACAAT
GATAAACATGATCATGAGCT

Product: putative conjugative transfer protein TraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MFLARKSTYCCFQSKLARIFQEEARKQLKLNFGTPECPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAG
IKDKVHRMQQSQSK

Sequences:

>Translated_94_residues
MFLARKSTYCCFQSKLARIFQEEARKQLKLNFGTPECPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAG
IKDKVHRMQQSQSK
>Mature_94_residues
MFLARKSTYCCFQSKLARIFQEEARKQLKLNFGTPECPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAG
IKDKVHRMQQSQSK

Specific function: Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with traG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009726
- InterPro:   IPR014121 [H]

Pfam domain/function: PF06986 TraN [H]

EC number: NA

Molecular weight: Translated: 10890; Mature: 10890

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLARKSTYCCFQSKLARIFQEEARKQLKLNFGTPECPKCRGLTVEELQKVDFTKINMDE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHH
LFGDILTKAQNSMNKDIIAGIKDKVHRMQQSQSK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFLARKSTYCCFQSKLARIFQEEARKQLKLNFGTPECPKCRGLTVEELQKVDFTKINMDE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHH
LFGDILTKAQNSMNKDIIAGIKDKVHRMQQSQSK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1593622; 7915817; 2050638 [H]