| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183740
Identifier: 189183740
GI number: 189183740
Start: 876860
End: 877111
Strand: Reverse
Name: 189183740
Synonym: OTT_0833
Alternate gene names: NA
Gene position: 877111-876860 (Counterclockwise)
Preceding gene: 189183741
Following gene: 189183739
Centisome position: 43.66
GC content: 29.76
Gene sequence:
>252_bases ATGGCAAGAAGATACAGTTATGATTTAAGAATGAAGATATTCAAAGCGGTAGATGATGGACTATCAATTGTTAAAGCATG TAAAATATTCAATATAAGTCGTAATACGATATATAGATGGAAACATCTTAAAAGGGAAACAGGAGATATTAAAGTAAAAC CTTATGGCCCAGCCAAAGGTTATAATGCAAAAATAGATCTCAAAGAATTTGAGGAGTTATCAATCATCATGATAAAACAG CTAAAGAATTAA
Upstream 100 bases:
>100_bases AATGTTGCCATACCCCATCCCATAAGGTATAGCATGAACGTAGGAAATAAGTACATAATATGCTAATATGAAAAGAGTAT AAAAAAAAAATAGATAAATA
Downstream 100 bases:
>100_bases GTATTATACTAGGTAATAGATTACAAAAAACTAGAATAAATTATTATAGAAAACTACTAGGATACACTTATAAAAAAACT CATCTTCATTCCAAAAGGGA
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MARRYSYDLRMKIFKAVDDGLSIVKACKIFNISRNTIYRWKHLKRETGDIKVKPYGPAKGYNAKIDLKEFEELSIIMIKQ LKN
Sequences:
>Translated_83_residues MARRYSYDLRMKIFKAVDDGLSIVKACKIFNISRNTIYRWKHLKRETGDIKVKPYGPAKGYNAKIDLKEFEELSIIMIKQ LKN >Mature_82_residues ARRYSYDLRMKIFKAVDDGLSIVKACKIFNISRNTIYRWKHLKRETGDIKVKPYGPAKGYNAKIDLKEFEELSIIMIKQL KN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9812; Mature: 9681
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRYSYDLRMKIFKAVDDGLSIVKACKIFNISRNTIYRWKHLKRETGDIKVKPYGPAKG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCCC YNAKIDLKEFEELSIIMIKQLKN CCCEECHHHHHHHHHHEEEECCC >Mature Secondary Structure ARRYSYDLRMKIFKAVDDGLSIVKACKIFNISRNTIYRWKHLKRETGDIKVKPYGPAKG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCCC YNAKIDLKEFEELSIIMIKQLKN CCCEECHHHHHHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA