| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183727
Identifier: 189183727
GI number: 189183727
Start: 861674
End: 862075
Strand: Reverse
Name: 189183727
Synonym: OTT_0820
Alternate gene names: NA
Gene position: 862075-861674 (Counterclockwise)
Preceding gene: 189183728
Following gene: 189183726
Centisome position: 42.91
GC content: 30.1
Gene sequence:
>402_bases ATGATTATGATACTAACAAGTAAGTTAATTTATTTTTGTTCTGCAGCATTGTTATCCTTAGGGTTATATATAATTCTTAG CAGTTATAATTACGTTAAGAAAACCATTGGCTTAGCAGTATTTCAAAATGCTGTCTTGATTTTTTATATAGCTCTTGCAA AAGCTAAAGAAGGAATAGTGCCAATAGATCAATGTTTTAACCAACTATCTCAACATTGTTCATCTATTACTTATTCTAGC CCTGTATCACATGTATTAATGCTAACTGCTATTGTTGTAGGTATAGCAACTATGTCTGTAAGTCTTAGTATCATTCGTCA AATTTACCAAAGTTTTAATAGCTGTAATGAAAATGATATTCTATTAGAGCTACAGAAAATGGAGCTAAAGCCAGATGAGT AA
Upstream 100 bases:
>100_bases AAGTATAGTCAGTCATTAGGTATTTTTATCGTTGAATTAGGTGTAGGTATAGCAGTAACCGCTAGCTTATTGATTATTTA TTATGTATTTGTAATTAATA
Downstream 100 bases:
>100_bases TATTTTTCAGGCTGTTAAAGATCATTTGGTGATATTAGAAGTTTTAATACCATTTTTTGGTAGTTTAATAGTAGTATTAT ATAAAAAAGTTGAGTCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Monovalent Cation/H+ Antiporter Subunit C; Multisubunit Na+/H+ Antiporter MnhC Subunit; Multisubunit Na+/H+ Antiporter Mnhc Subunit; NADH-Ubiquinone Oxidoreductase Subunit 4L
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MIMILTSKLIYFCSAALLSLGLYIILSSYNYVKKTIGLAVFQNAVLIFYIALAKAKEGIVPIDQCFNQLSQHCSSITYSS PVSHVLMLTAIVVGIATMSVSLSIIRQIYQSFNSCNENDILLELQKMELKPDE
Sequences:
>Translated_133_residues MIMILTSKLIYFCSAALLSLGLYIILSSYNYVKKTIGLAVFQNAVLIFYIALAKAKEGIVPIDQCFNQLSQHCSSITYSS PVSHVLMLTAIVVGIATMSVSLSIIRQIYQSFNSCNENDILLELQKMELKPDE >Mature_133_residues MIMILTSKLIYFCSAALLSLGLYIILSSYNYVKKTIGLAVFQNAVLIFYIALAKAKEGIVPIDQCFNQLSQHCSSITYSS PVSHVLMLTAIVVGIATMSVSLSIIRQIYQSFNSCNENDILLELQKMELKPDE
Specific function: Unknown
COG id: COG1006
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhC subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14776; Mature: 14776
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMILTSKLIYFCSAALLSLGLYIILSSYNYVKKTIGLAVFQNAVLIFYIALAKAKEGIV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PIDQCFNQLSQHCSSITYSSPVSHVLMLTAIVVGIATMSVSLSIIRQIYQSFNSCNENDI CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH LLELQKMELKPDE HHHHHHCCCCCCC >Mature Secondary Structure MIMILTSKLIYFCSAALLSLGLYIILSSYNYVKKTIGLAVFQNAVLIFYIALAKAKEGIV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PIDQCFNQLSQHCSSITYSSPVSHVLMLTAIVVGIATMSVSLSIIRQIYQSFNSCNENDI CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH LLELQKMELKPDE HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA