| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is pccB
Identifier: 189183716
GI number: 189183716
Start: 853380
End: 853736
Strand: Direct
Name: pccB
Synonym: OTT_0809
Alternate gene names: NA
Gene position: 853380-853736 (Clockwise)
Preceding gene: 189183715
Following gene: 189183717
Centisome position: 42.48
GC content: 29.13
Gene sequence:
>357_bases TTGAAGCGATTATTTCACATCATCGTTTTATTGAAGGAAATACTAACACTAATTTTATTCATGAAGAATATCAAGATGTT TTTGTTGGAGCTAAGCTTATATCAGAAATTACAGAAGTTTTTTTTAGCAGCTGCAATTTATATTTTTATTTTTGAACAAA AGCAAGTTGCTACTATAGCAGATCAAATTGTTAAGCAAGCAAAAAACATTGGCACTAGATGGATTGTTACTATACTTAGA GGACAAATTGAGCTTCAAAATGCACATTCAAAAAAATTTAGCATACAAAAACTATTGAAGGATACAATTAACTCGCTGAA AGAAATTGCTGAAGATAGAGAAATATCGCTTAGTTAG
Upstream 100 bases:
>100_bases TTACGTCTATTTCAATATTTATCAGCAATAATTTTGAACTACGTTAACCAGTTTCGAAAGAGGTCTATTATATGCGGTAT TGCACATAACATTACCTTTC
Downstream 100 bases:
>100_bases AATGTTCAGGACAACATCAATGATATTGTTATTGTAGAGAGATAGTTATCTATTGCAAACTATACTTAGTCAATTAATAA GTGGGGCTATTAGAGTTAAT
Product: propionyl-CoA carboxylase beta chain precursor
Products: NA
Alternate protein names: Signal Transduction Histidine Kinase
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKRLFHIIVLLKEILTLILFMKNIKMFLLELSLYQKLQKFFLAAAIYIFIFEQKQVATIADQIVKQAKNIGTRWIVTILR GQIELQNAHSKKFSIQKLLKDTINSLKEIAEDREISLS
Sequences:
>Translated_118_residues MKRLFHIIVLLKEILTLILFMKNIKMFLLELSLYQKLQKFFLAAAIYIFIFEQKQVATIADQIVKQAKNIGTRWIVTILR GQIELQNAHSKKFSIQKLLKDTINSLKEIAEDREISLS >Mature_118_residues MKRLFHIIVLLKEILTLILFMKNIKMFLLELSLYQKLQKFFLAAAIYIFIFEQKQVATIADQIVKQAKNIGTRWIVTILR GQIELQNAHSKKFSIQKLLKDTINSLKEIAEDREISLS
Specific function: Unknown
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13835; Mature: 13835
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLFHIIVLLKEILTLILFMKNIKMFLLELSLYQKLQKFFLAAAIYIFIFEQKQVATIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH DQIVKQAKNIGTRWIVTILRGQIELQNAHSKKFSIQKLLKDTINSLKEIAEDREISLS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKRLFHIIVLLKEILTLILFMKNIKMFLLELSLYQKLQKFFLAAAIYIFIFEQKQVATIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH DQIVKQAKNIGTRWIVTILRGQIELQNAHSKKFSIQKLLKDTINSLKEIAEDREISLS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA