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The map label for this gene is pccB [H]

Identifier: 189183714

GI number: 189183714

Start: 852468

End: 852659

Strand: Direct

Name: pccB [H]

Synonym: OTT_0807

Alternate gene names: 189183714

Gene position: 852468-852659 (Clockwise)

Preceding gene: 189183713

Following gene: 189183715

Centisome position: 42.43

GC content: 33.33

Gene sequence:

>192_bases
ATGTTTGCCAAACATCGCTGTAGTAACTTTGATATGAGTAGCAAAATGTTTCTTGGTGATGGAGTAATTACATGCCATGG
TACAATCAATTGTCGTTTAGTATTTGTATATAGCCAAGATTTTACTGTTCTTGGTTGTTCATTAGGAGAGGTGTATGCTA
AAAAAATCTGTAAATTAATTGCACTGCTATAG

Upstream 100 bases:

>100_bases
AGGAAGTAGCAAAATTGATATTCAGCATAGTAAAGTGAAGCTTACAGCTCGTGAACGCATAGAAGTTTTACTTGATCATT
AGAGCTTTGAAGAAGTAGGT

Downstream 100 bases:

>100_bases
ATGTTAGAGCTACAATAATCTGTATTAGTAACTCTAGAAAGAGCTAGAATTCAGGAAGGTATAGATTCGCTTGGAGGATA
TGGCGAGATTTTTCAGAAAA

Product: propionyl-CoA carboxylase beta chain precursor

Products: NA

Alternate protein names: PCCase; Propanoyl-CoA:carbon dioxide ligase [H]

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MFAKHRCSNFDMSSKMFLGDGVITCHGTINCRLVFVYSQDFTVLGCSLGEVYAKKICKLIALL

Sequences:

>Translated_63_residues
MFAKHRCSNFDMSSKMFLGDGVITCHGTINCRLVFVYSQDFTVLGCSLGEVYAKKICKLIALL
>Mature_63_residues
MFAKHRCSNFDMSSKMFLGDGVITCHGTINCRLVFVYSQDFTVLGCSLGEVYAKKICKLIALL

Specific function: Unknown

COG id: COG4799

COG function: function code I; Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 carboxyltransferase domain [H]

Homologues:

Organism=Homo sapiens, GI119943100, Length=62, Percent_Identity=53.2258064516129, Blast_Score=72, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI25147359, Length=60, Percent_Identity=53.3333333333333, Blast_Score=73, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI25147362, Length=60, Percent_Identity=53.3333333333333, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000022
- InterPro:   IPR011763
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =6.4.1.3 [H]

Molecular weight: Translated: 7025; Mature: 7025

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
12.7 %Cys+Met (Translated Protein)
7.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
12.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAKHRCSNFDMSSKMFLGDGVITCHGTINCRLVFVYSQDFTVLGCSLGEVYAKKICKLI
CCCCCCCCCCCCCCEEEECCCEEEEECCCEEEEEEEECCCCEEEECCHHHHHHHHHHHHH
ALL
HCC
>Mature Secondary Structure
MFAKHRCSNFDMSSKMFLGDGVITCHGTINCRLVFVYSQDFTVLGCSLGEVYAKKICKLI
CCCCCCCCCCCCCCEEEECCCEEEEECCCEEEEEEEECCCCEEEECCHHHHHHHHHHHHH
ALL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]