| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183711
Identifier: 189183711
GI number: 189183711
Start: 849423
End: 850766
Strand: Direct
Name: 189183711
Synonym: OTT_0804
Alternate gene names: NA
Gene position: 849423-850766 (Clockwise)
Preceding gene: 189183710
Following gene: 189183713
Centisome position: 42.28
GC content: 30.95
Gene sequence:
>1344_bases ATGTCAAATTTATATCATATACTTCATAAACTACCAGCTATAGAACATGAAGACATGATGGTTGAATATGAAAATTTAGC TCAATCTTTAGTACAATCAGGAAAGCTACGAGTTGATGCTGAACCAAAAATCAATTTTGTTCGTTTATCTGAACCTAGCT TGAATGTTAATATTGCTATTTCAAATGAGGAGCTTAATGATCCTAAGCTTCAGCATCATACTAAAGCAATGCTAATTAAT ATTTATAAGAAAATAATAGAAAAAGATAAAGTCATTCATAAAGTTAATCAGATAGTTAGTGTTTTACAGAAAAAAATGGC TATGCAGCTTGCAGTAGAACAGGATCTACTACTTAAATTAGCAAGGTTATTTGTACAATCAGCCCATCCAATAGTAATTC ATTGGCTGCTATTAGAACGAGTAGAAGTATTTATATCCTATTCAAACCAGATAGGAGATGTTATGGATATTGCTACCTGG AAATATGCTGGTCAAAATAGTGGTATGCAAAGTATCAATGGAAATAATATAGCAATATATGTTTCATGTGGTGGTAATCC ATTCTTTTTTACTCAACGCTATCAAGAGCAATCTATTTATGGCGATGGTTGGCCAGCGATAGCAAGACTGCAAATCATTG CAGCACAAGAATTGGGGCATTATGCTGATATTTACCGCGATATTAATGCTAATATCGTTGGCCGACATTCAGTTAATTCA TCTTTTACAAAGGCTAAACCTAATGTTTTACATGCAAGGCGTAGCGACTTATCTAGATGCTATAAAATTCTACAAGACCT TGAGTATATAGGACTTAATAGCTTAATTACTTATGAAAAATCAGTAAAATTTTATCGTAAAAATAAAGTTAAAGGTATTA AACTATTATGGGCTAGACTGTTAAGTTTTTTCTATAAGCAAAAGCTTTATTTCATGATTAAACAAGAAGATTTTATATTT GTTAAAGTATATAAAAATGAACAATATTCTGGGTTAATGTTAAAAGCAATGATTCTTGATATGATCTCAAACTTAGAACC AAAAGCTGAAGTCTATAAAAGAGATGATCCTGATGCTGAGGAAGCTATTGCTTGCGTTGAAGCTTTAGCTAGAGTGCCGC AGCAAGTAATAAAATGGGGACATATAACTACAATGTCAATAATGCAAGATCTGTATTATATTTACTATAAGCAGGTAATT CCATCATTAATTGATAGATATCAGTATATTACAGGAAAAACTTATATGCGAAATCTGAATTATGTTAGCCAAACTCTCAA ATATAGAATAAAGAAATTATGGCCATTTTTTAAAAAAACTTCTTTACCTTCTCGTGAAGTTTAA
Upstream 100 bases:
>100_bases TGCTAGAATTTATATCATATATGCTTAGTTATATGAAATTTTGTGGTTATATTTTATAGTAATATTATCTATATATCTAT GCTATCTTTAAAGCAATATT
Downstream 100 bases:
>100_bases AAAGTCTGCATTTTTAATGCTACAATAACCTAAATTCGATATAAGGTAAGAGTTAGAGTATAAAGAAAAATATCGTAAGA ATAAGCTCAGTATAGAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSNLYHILHKLPAIEHEDMMVEYENLAQSLVQSGKLRVDAEPKINFVRLSEPSLNVNIAISNEELNDPKLQHHTKAMLIN IYKKIIEKDKVIHKVNQIVSVLQKKMAMQLAVEQDLLLKLARLFVQSAHPIVIHWLLLERVEVFISYSNQIGDVMDIATW KYAGQNSGMQSINGNNIAIYVSCGGNPFFFTQRYQEQSIYGDGWPAIARLQIIAAQELGHYADIYRDINANIVGRHSVNS SFTKAKPNVLHARRSDLSRCYKILQDLEYIGLNSLITYEKSVKFYRKNKVKGIKLLWARLLSFFYKQKLYFMIKQEDFIF VKVYKNEQYSGLMLKAMILDMISNLEPKAEVYKRDDPDAEEAIACVEALARVPQQVIKWGHITTMSIMQDLYYIYYKQVI PSLIDRYQYITGKTYMRNLNYVSQTLKYRIKKLWPFFKKTSLPSREV
Sequences:
>Translated_447_residues MSNLYHILHKLPAIEHEDMMVEYENLAQSLVQSGKLRVDAEPKINFVRLSEPSLNVNIAISNEELNDPKLQHHTKAMLIN IYKKIIEKDKVIHKVNQIVSVLQKKMAMQLAVEQDLLLKLARLFVQSAHPIVIHWLLLERVEVFISYSNQIGDVMDIATW KYAGQNSGMQSINGNNIAIYVSCGGNPFFFTQRYQEQSIYGDGWPAIARLQIIAAQELGHYADIYRDINANIVGRHSVNS SFTKAKPNVLHARRSDLSRCYKILQDLEYIGLNSLITYEKSVKFYRKNKVKGIKLLWARLLSFFYKQKLYFMIKQEDFIF VKVYKNEQYSGLMLKAMILDMISNLEPKAEVYKRDDPDAEEAIACVEALARVPQQVIKWGHITTMSIMQDLYYIYYKQVI PSLIDRYQYITGKTYMRNLNYVSQTLKYRIKKLWPFFKKTSLPSREV >Mature_446_residues SNLYHILHKLPAIEHEDMMVEYENLAQSLVQSGKLRVDAEPKINFVRLSEPSLNVNIAISNEELNDPKLQHHTKAMLINI YKKIIEKDKVIHKVNQIVSVLQKKMAMQLAVEQDLLLKLARLFVQSAHPIVIHWLLLERVEVFISYSNQIGDVMDIATWK YAGQNSGMQSINGNNIAIYVSCGGNPFFFTQRYQEQSIYGDGWPAIARLQIIAAQELGHYADIYRDINANIVGRHSVNSS FTKAKPNVLHARRSDLSRCYKILQDLEYIGLNSLITYEKSVKFYRKNKVKGIKLLWARLLSFFYKQKLYFMIKQEDFIFV KVYKNEQYSGLMLKAMILDMISNLEPKAEVYKRDDPDAEEAIACVEALARVPQQVIKWGHITTMSIMQDLYYIYYKQVIP SLIDRYQYITGKTYMRNLNYVSQTLKYRIKKLWPFFKKTSLPSREV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020183 - ProDom: PD216750 [H]
Pfam domain/function: PF10871 DUF2748 [H]
EC number: NA
Molecular weight: Translated: 52104; Mature: 51972
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLYHILHKLPAIEHEDMMVEYENLAQSLVQSGKLRVDAEPKINFVRLSEPSLNVNIAI CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCEEEEEEE SNEELNDPKLQHHTKAMLINIYKKIIEKDKVIHKVNQIVSVLQKKMAMQLAVEQDLLLKL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLFVQSAHPIVIHWLLLERVEVFISYSNQIGDVMDIATWKYAGQNSGMQSINGNNIAIY HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCCCCCCCCCEEEE VSCGGNPFFFTQRYQEQSIYGDGWPAIARLQIIAAQELGHYADIYRDINANIVGRHSVNS EEECCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC SFTKAKPNVLHARRSDLSRCYKILQDLEYIGLNSLITYEKSVKFYRKNKVKGIKLLWARL CHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH LSFFYKQKLYFMIKQEDFIFVKVYKNEQYSGLMLKAMILDMISNLEPKAEVYKRDDPDAE HHHHHHHHHHEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHH EAIACVEALARVPQQVIKWGHITTMSIMQDLYYIYYKQVIPSLIDRYQYITGKTYMRNLN HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH YVSQTLKYRIKKLWPFFKKTSLPSREV HHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SNLYHILHKLPAIEHEDMMVEYENLAQSLVQSGKLRVDAEPKINFVRLSEPSLNVNIAI CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCEEEEEEE SNEELNDPKLQHHTKAMLINIYKKIIEKDKVIHKVNQIVSVLQKKMAMQLAVEQDLLLKL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLFVQSAHPIVIHWLLLERVEVFISYSNQIGDVMDIATWKYAGQNSGMQSINGNNIAIY HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCCCCCCCCCEEEE VSCGGNPFFFTQRYQEQSIYGDGWPAIARLQIIAAQELGHYADIYRDINANIVGRHSVNS EEECCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC SFTKAKPNVLHARRSDLSRCYKILQDLEYIGLNSLITYEKSVKFYRKNKVKGIKLLWARL CHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH LSFFYKQKLYFMIKQEDFIFVKVYKNEQYSGLMLKAMILDMISNLEPKAEVYKRDDPDAE HHHHHHHHHHEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHH EAIACVEALARVPQQVIKWGHITTMSIMQDLYYIYYKQVIPSLIDRYQYITGKTYMRNLN HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH YVSQTLKYRIKKLWPFFKKTSLPSREV HHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]