| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183686
Identifier: 189183686
GI number: 189183686
Start: 821001
End: 821603
Strand: Direct
Name: 189183686
Synonym: OTT_0779
Alternate gene names: NA
Gene position: 821001-821603 (Clockwise)
Preceding gene: 189183685
Following gene: 189183687
Centisome position: 40.87
GC content: 29.19
Gene sequence:
>603_bases ATGTTACTACTGCTAGCTGTATTAATGCATTATCTGAAAGGAGATGATACTGGTATATATTACATCGATTCTACAAAGTT AGCAATTTGTCATAATAAACGTACCTCCAGCAATAGAGTTTTTAACAGAATTTCTAAAATTGGTAAGAGTAGTTATGGCT GGTTCTTATGCTTTAAGCTATATATTATAATCAATAATAAAGGTAAAATAATGTCAGTTAAAATTACTAAAGGCAATAAA AGCGATCTATCTATAGCTTCAGTTATTTCTAAAGGCCTATCTGGTAAATTGTTTGGTGATAAAGCTTATATATCTAAAGA GTTATTTCATCAACTGCTGACCAATGGTCTACGTTTATTTACTAATATTCGTAAAGATATGAAAACATATTTATTGGATA TACAAGATAATAGGTTATTAAATAAACGTTCTTTAATTGAGTCTGTCTTTAATGTACTAAAAAAACATATGCATTTAGAG CATACTAGACACCGTTCTCCTCTTAATTTCTTTGTTCATATAATTGCTTCTCTTGCTAGTTATTCTATCTCTAAACTTAA TCCCAGTCTTATCTCTTCTTCTTCTCCTGACTCCTTATCCTAA
Upstream 100 bases:
>100_bases CAATAGTAATATATTTTTATTTATCTCCATGCAAGGATTTTAAAAATTATTATCTATTTGTTTACCAAGTTATAGTAGAA TAATACAACTCTGGCCTAGA
Downstream 100 bases:
>100_bases ATTGACGTTATATGAGAAAATTGGATTATATAATGATTACCAAATTTGATATTATGGATCTTTGAAAGCAATAACTTACG ACAGGCTATAAGCAATGATA
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MLLLLAVLMHYLKGDDTGIYYIDSTKLAICHNKRTSSNRVFNRISKIGKSSYGWFLCFKLYIIINNKGKIMSVKITKGNK SDLSIASVISKGLSGKLFGDKAYISKELFHQLLTNGLRLFTNIRKDMKTYLLDIQDNRLLNKRSLIESVFNVLKKHMHLE HTRHRSPLNFFVHIIASLASYSISKLNPSLISSSSPDSLS
Sequences:
>Translated_200_residues MLLLLAVLMHYLKGDDTGIYYIDSTKLAICHNKRTSSNRVFNRISKIGKSSYGWFLCFKLYIIINNKGKIMSVKITKGNK SDLSIASVISKGLSGKLFGDKAYISKELFHQLLTNGLRLFTNIRKDMKTYLLDIQDNRLLNKRSLIESVFNVLKKHMHLE HTRHRSPLNFFVHIIASLASYSISKLNPSLISSSSPDSLS >Mature_200_residues MLLLLAVLMHYLKGDDTGIYYIDSTKLAICHNKRTSSNRVFNRISKIGKSSYGWFLCFKLYIIINNKGKIMSVKITKGNK SDLSIASVISKGLSGKLFGDKAYISKELFHQLLTNGLRLFTNIRKDMKTYLLDIQDNRLLNKRSLIESVFNVLKKHMHLE HTRHRSPLNFFVHIIASLASYSISKLNPSLISSSSPDSLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22741; Mature: 22741
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLLAVLMHYLKGDDTGIYYIDSTKLAICHNKRTSSNRVFNRISKIGKSSYGWFLCFKL CHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHEEEEE YIIINNKGKIMSVKITKGNKSDLSIASVISKGLSGKLFGDKAYISKELFHQLLTNGLRLF EEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH TNIRKDMKTYLLDIQDNRLLNKRSLIESVFNVLKKHMHLEHTRHRSPLNFFVHIIASLAS HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH YSISKLNPSLISSSSPDSLS HHHHHCCHHHHCCCCCCCCC >Mature Secondary Structure MLLLLAVLMHYLKGDDTGIYYIDSTKLAICHNKRTSSNRVFNRISKIGKSSYGWFLCFKL CHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHEEEEE YIIINNKGKIMSVKITKGNKSDLSIASVISKGLSGKLFGDKAYISKELFHQLLTNGLRLF EEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH TNIRKDMKTYLLDIQDNRLLNKRSLIESVFNVLKKHMHLEHTRHRSPLNFFVHIIASLAS HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH YSISKLNPSLISSSSPDSLS HHHHHCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA