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The map label for this gene is virB6

Identifier: 189183681

GI number: 189183681

Start: 811662

End: 814226

Strand: Direct

Name: virB6

Synonym: OTT_0774

Alternate gene names: NA

Gene position: 811662-814226 (Clockwise)

Preceding gene: 189183680

Following gene: 189183682

Centisome position: 40.4

GC content: 29.55

Gene sequence:

>2565_bases
ATGACTAAAATACTTAAAATTCTAATAACAAAAAACAAATCATTGATGACTTACATAAATATATTGATTTTGCTATCATA
TATGTTTGTGTGTACCAGTATTCAAGCTTCAAATGAGTTACCTCAAGCTGGAGCGCAACTACCTACCTCTAATTCTCTTC
AATGGATGGATAAATATCCTAATGATAGTAATACAGGGTGTACAAGTGTATCACCTACATGGTTGAGTGTTGCAGATGTA
AAATGGATAGATATACAAGCTAACTCCAATAATAATTGGATTGATTCTGGTATTATGACTAAAGCTGGCAAAAGTATTTC
AGTTGAGATTCCAAAGATTAGTCAAAATTTTAGAAAGTTACAGAAAAGATATCTAGTATTACATAGAGTTGATCCGCGAT
TTCCTGTAATTGGGCAAACTTTTATTATTGAATTAGGCACAAACAATAAGCCTATTTCACGTCTTCATAATTTTGAGAAT
GGTAAACTATTGAATTACCAAAATGAGAATAGTAGTAATTTTCAAAATGGTAGTACTAATTTTACAAATGCTATAAATCT
GCAGAAAAAATTTTTTAATGGCGCAGACACTAAAATTAGTGTTAAAGCTGGTGATGTTATCGATATAGCTTTAATTTCGT
CTGTCGATTTTTTTAATAAATTGCAGTTAAAAGGTGGTACTGAAAAATCTGGATTTACTGGAGAGTTATATCCTAGATGG
GATGATTATAAATATTATAAACCTTATGGCATATATACTGTATCACTAAAGTCTAATGTTGGTGTTGTTGATAATGCTTT
ATTGGTTACTGGTCAAACTTCTGATAAGAAGGCATTAAGTAAGTTATTAGTTGGTGTTAAGAGTATTGATAGTATAAGCA
GTTTTGAAAAATGTAATTTGAATAACTTGTCTAAGTCTAAATCCTGTATAATGGAATCTGGAATAGGAATGGAAATTAAA
TTGGATCAAGAAGTTCTAAAGTCTAAGTTTGATAAATTTTTAGTTGGTTATAATGTGGGTAATGCGCATAGCAGCGCTTT
TCTCGATAAGCCAATAGAGGGAATGTATCATATAGTAGCAAAAAGTGATGGTGACTTGAGTTTTTCTACGCCATTGTTTA
ATAATAATGTAAAATACCGTACTAATGGACTACAAGATGTGGAATATAGCAGTATATTAAGTAGCTGTAGTACATTGAAT
GAATTTGAACAAAAATATTTAAATTCTATTCTTAGTTCCAAGCAAGAAATAATTCAAGGAATAGTTGTTGATAAAACATT
AGTAGGGCGGTACTTGATGTACATAACTATTGATAGACATAATATAGTTAGTGATGAATATGATGGTGATATAGAGTATA
TTATTTCAAATACAACTCCAACCTTATCTACTAAAGGTACTACTTTACCTAGAAATGGAATAAATATAGTTACTCCTGAA
TCAGCAAAGCTATGGTTTCGTTTTGTAAAAAAAAATAATGAACAATTTAATTTGAAGGTAACAGTTCCACCTGATAGTGA
AGGGAAAATAAAGGTTGCTGGATTTTTTTATGATAATATTTATATACCAATCAAGCTAAAAGTTGAAAAGTTTTCTAAAT
TGTTTTATTTTGGCTTAGCTAAGAATGCAGCTTTAAAAAAGGTATTCAGTATTTTAGCAATTCTTTACATTACACTATAT
GGTATTTATTTTTTATTAGGAGTAGTAAAAGTTACTGCTTACGACTTACTTATACGATGTAGTAAAATTATAGTTATAGC
CGCATTGTTTAACGAAAGTAGCCAACATATTTTTTATGATACTCTATTTCCAATGTTTGATGGTGGTATAAATAGTTTAA
TTAGCTATGCTGTTAAAACTACTGCCAGTGATGTTGACAATCCGTTTAAGTTTTTTGATTTAGTTGTTAGTAGATATATT
GATGTTAACTTTCTAAAGATAATATTAATTGAAATAGTTAACATACATAATGGTTTGACGATATTAGGAATATTAACTTT
ATGGTCAATCATGAAATTTGTAACCATTATGGTTAAAGTGTGTATGGAACTTCTGATGTCTATGATTGCCATTGCAATAT
TAGTTGGGTTAGCACCGATGTTTATAGTTTTTATATTATTTGATAGGACAGCAGAAATCTTTAAAAGATGGCTTAGTGCT
CTTTTATTAAATACATTAATGCCAGTGATAATGATTATCTTTATATTAATTATTAATGAATTGATGTTAGTTGCAGTGGA
AGCTGCTTTTCCTGAAATTAGAATTTGTTGGGGCACATTGTTTGATATAGAATTAAATCTTGACTTATCTGCAATTGGAT
TACCAACAGCATTTAGTATTCCACTGATGGCTGTACCTTTCTATAACGTTGTTTTCATTGGTGGAAATTTATTTAATGCT
ATGGATTTAGGTAACAGTTTTGCAGGTTCGTTAGCAGGAGTTTTTTTACTGTATAACTTAGTTTTACTAGCTGGAACACT
AGTTGGGTCTCAAGTATTTACTAAGGGAATAAATAGAAAGGGAATGAGCTATGTAAAAAGTATCATGATGCAACTTTTAA
GTTAG

Upstream 100 bases:

>100_bases
AGGGTGAATAATCAAGAAATTGATTTGAATAGCCAAAAACCATCGCATAATGAATCTTCTGTTAGAAGGCATGATTTGAA
TAAGAAAAATTTTGAGAATA

Downstream 100 bases:

>100_bases
TGACATGATATTCAGTATTTTAGGAGAATAAGATTTATGAACAAGAAGGTTCTAATTTTATCTATGCTTGTAACTTTAGC
TCATTATTATGATTATCATT

Product: type IV secretion system protein VirB6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 854; Mature: 853

Protein sequence:

>854_residues
MTKILKILITKNKSLMTYINILILLSYMFVCTSIQASNELPQAGAQLPTSNSLQWMDKYPNDSNTGCTSVSPTWLSVADV
KWIDIQANSNNNWIDSGIMTKAGKSISVEIPKISQNFRKLQKRYLVLHRVDPRFPVIGQTFIIELGTNNKPISRLHNFEN
GKLLNYQNENSSNFQNGSTNFTNAINLQKKFFNGADTKISVKAGDVIDIALISSVDFFNKLQLKGGTEKSGFTGELYPRW
DDYKYYKPYGIYTVSLKSNVGVVDNALLVTGQTSDKKALSKLLVGVKSIDSISSFEKCNLNNLSKSKSCIMESGIGMEIK
LDQEVLKSKFDKFLVGYNVGNAHSSAFLDKPIEGMYHIVAKSDGDLSFSTPLFNNNVKYRTNGLQDVEYSSILSSCSTLN
EFEQKYLNSILSSKQEIIQGIVVDKTLVGRYLMYITIDRHNIVSDEYDGDIEYIISNTTPTLSTKGTTLPRNGINIVTPE
SAKLWFRFVKKNNEQFNLKVTVPPDSEGKIKVAGFFYDNIYIPIKLKVEKFSKLFYFGLAKNAALKKVFSILAILYITLY
GIYFLLGVVKVTAYDLLIRCSKIIVIAALFNESSQHIFYDTLFPMFDGGINSLISYAVKTTASDVDNPFKFFDLVVSRYI
DVNFLKIILIEIVNIHNGLTILGILTLWSIMKFVTIMVKVCMELLMSMIAIAILVGLAPMFIVFILFDRTAEIFKRWLSA
LLLNTLMPVIMIIFILIINELMLVAVEAAFPEIRICWGTLFDIELNLDLSAIGLPTAFSIPLMAVPFYNVVFIGGNLFNA
MDLGNSFAGSLAGVFLLYNLVLLAGTLVGSQVFTKGINRKGMSYVKSIMMQLLS

Sequences:

>Translated_854_residues
MTKILKILITKNKSLMTYINILILLSYMFVCTSIQASNELPQAGAQLPTSNSLQWMDKYPNDSNTGCTSVSPTWLSVADV
KWIDIQANSNNNWIDSGIMTKAGKSISVEIPKISQNFRKLQKRYLVLHRVDPRFPVIGQTFIIELGTNNKPISRLHNFEN
GKLLNYQNENSSNFQNGSTNFTNAINLQKKFFNGADTKISVKAGDVIDIALISSVDFFNKLQLKGGTEKSGFTGELYPRW
DDYKYYKPYGIYTVSLKSNVGVVDNALLVTGQTSDKKALSKLLVGVKSIDSISSFEKCNLNNLSKSKSCIMESGIGMEIK
LDQEVLKSKFDKFLVGYNVGNAHSSAFLDKPIEGMYHIVAKSDGDLSFSTPLFNNNVKYRTNGLQDVEYSSILSSCSTLN
EFEQKYLNSILSSKQEIIQGIVVDKTLVGRYLMYITIDRHNIVSDEYDGDIEYIISNTTPTLSTKGTTLPRNGINIVTPE
SAKLWFRFVKKNNEQFNLKVTVPPDSEGKIKVAGFFYDNIYIPIKLKVEKFSKLFYFGLAKNAALKKVFSILAILYITLY
GIYFLLGVVKVTAYDLLIRCSKIIVIAALFNESSQHIFYDTLFPMFDGGINSLISYAVKTTASDVDNPFKFFDLVVSRYI
DVNFLKIILIEIVNIHNGLTILGILTLWSIMKFVTIMVKVCMELLMSMIAIAILVGLAPMFIVFILFDRTAEIFKRWLSA
LLLNTLMPVIMIIFILIINELMLVAVEAAFPEIRICWGTLFDIELNLDLSAIGLPTAFSIPLMAVPFYNVVFIGGNLFNA
MDLGNSFAGSLAGVFLLYNLVLLAGTLVGSQVFTKGINRKGMSYVKSIMMQLLS
>Mature_853_residues
TKILKILITKNKSLMTYINILILLSYMFVCTSIQASNELPQAGAQLPTSNSLQWMDKYPNDSNTGCTSVSPTWLSVADVK
WIDIQANSNNNWIDSGIMTKAGKSISVEIPKISQNFRKLQKRYLVLHRVDPRFPVIGQTFIIELGTNNKPISRLHNFENG
KLLNYQNENSSNFQNGSTNFTNAINLQKKFFNGADTKISVKAGDVIDIALISSVDFFNKLQLKGGTEKSGFTGELYPRWD
DYKYYKPYGIYTVSLKSNVGVVDNALLVTGQTSDKKALSKLLVGVKSIDSISSFEKCNLNNLSKSKSCIMESGIGMEIKL
DQEVLKSKFDKFLVGYNVGNAHSSAFLDKPIEGMYHIVAKSDGDLSFSTPLFNNNVKYRTNGLQDVEYSSILSSCSTLNE
FEQKYLNSILSSKQEIIQGIVVDKTLVGRYLMYITIDRHNIVSDEYDGDIEYIISNTTPTLSTKGTTLPRNGINIVTPES
AKLWFRFVKKNNEQFNLKVTVPPDSEGKIKVAGFFYDNIYIPIKLKVEKFSKLFYFGLAKNAALKKVFSILAILYITLYG
IYFLLGVVKVTAYDLLIRCSKIIVIAALFNESSQHIFYDTLFPMFDGGINSLISYAVKTTASDVDNPFKFFDLVVSRYID
VNFLKIILIEIVNIHNGLTILGILTLWSIMKFVTIMVKVCMELLMSMIAIAILVGLAPMFIVFILFDRTAEIFKRWLSAL
LLNTLMPVIMIIFILIINELMLVAVEAAFPEIRICWGTLFDIELNLDLSAIGLPTAFSIPLMAVPFYNVVFIGGNLFNAM
DLGNSFAGSLAGVFLLYNLVLLAGTLVGSQVFTKGINRKGMSYVKSIMMQLLS

Specific function: Unknown

COG id: COG3704

COG function: function code U; Type IV secretory pathway, VirB6 components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbL/virB6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007688 [H]

Pfam domain/function: PF04610 TrbL [H]

EC number: NA

Molecular weight: Translated: 95560; Mature: 95429

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKILKILITKNKSLMTYINILILLSYMFVCTSIQASNELPQAGAQLPTSNSLQWMDKYP
CCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCC
NDSNTGCTSVSPTWLSVADVKWIDIQANSNNNWIDSGIMTKAGKSISVEIPKISQNFRKL
CCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCEECCCCHHCCCCEEEEECCHHHHHHHHH
QKRYLVLHRVDPRFPVIGQTFIIELGTNNKPISRLHNFENGKLLNYQNENSSNFQNGSTN
HHHHHHHEECCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCCCC
FTNAINLQKKFFNGADTKISVKAGDVIDIALISSVDFFNKLQLKGGTEKSGFTGELYPRW
CCHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHEEECCCCCCCCCCCCCCCCC
DDYKYYKPYGIYTVSLKSNVGVVDNALLVTGQTSDKKALSKLLVGVKSIDSISSFEKCNL
CCCCEECCCEEEEEEECCCCCEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
NNLSKSKSCIMESGIGMEIKLDQEVLKSKFDKFLVGYNVGNAHSSAFLDKPIEGMYHIVA
CCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHEEEEECCCCCCCHHHHCCCHHHHEEEEE
KSDGDLSFSTPLFNNNVKYRTNGLQDVEYSSILSSCSTLNEFEQKYLNSILSSKQEIIQG
ECCCCCEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVVDKTLVGRYLMYITIDRHNIVSDEYDGDIEYIISNTTPTLSTKGTTLPRNGINIVTPE
HHHHHHHHCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCC
SAKLWFRFVKKNNEQFNLKVTVPPDSEGKIKVAGFFYDNIYIPIKLKVEKFSKLFYFGLA
HHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEEECCEEEEEEEEHHHHHHHHHHHHH
KNAALKKVFSILAILYITLYGIYFLLGVVKVTAYDLLIRCSKIIVIAALFNESSQHIFYD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHCCCCCEEEHH
TLFPMFDGGINSLISYAVKTTASDVDNPFKFFDLVVSRYIDVNFLKIILIEIVNIHNGLT
HHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHH
ILGILTLWSIMKFVTIMVKVCMELLMSMIAIAILVGLAPMFIVFILFDRTAEIFKRWLSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLNTLMPVIMIIFILIINELMLVAVEAAFPEIRICWGTLFDIELNLDLSAIGLPTAFSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCEEEECCCCHHCC
PLMAVPFYNVVFIGGNLFNAMDLGNSFAGSLAGVFLLYNLVLLAGTLVGSQVFTKGINRK
CEEECCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GMSYVKSIMMQLLS
HHHHHHHHHHHHHC
>Mature Secondary Structure 
TKILKILITKNKSLMTYINILILLSYMFVCTSIQASNELPQAGAQLPTSNSLQWMDKYP
CHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCC
NDSNTGCTSVSPTWLSVADVKWIDIQANSNNNWIDSGIMTKAGKSISVEIPKISQNFRKL
CCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCEECCCCHHCCCCEEEEECCHHHHHHHHH
QKRYLVLHRVDPRFPVIGQTFIIELGTNNKPISRLHNFENGKLLNYQNENSSNFQNGSTN
HHHHHHHEECCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCCCC
FTNAINLQKKFFNGADTKISVKAGDVIDIALISSVDFFNKLQLKGGTEKSGFTGELYPRW
CCHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHEEECCCCCCCCCCCCCCCCC
DDYKYYKPYGIYTVSLKSNVGVVDNALLVTGQTSDKKALSKLLVGVKSIDSISSFEKCNL
CCCCEECCCEEEEEEECCCCCEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
NNLSKSKSCIMESGIGMEIKLDQEVLKSKFDKFLVGYNVGNAHSSAFLDKPIEGMYHIVA
CCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHEEEEECCCCCCCHHHHCCCHHHHEEEEE
KSDGDLSFSTPLFNNNVKYRTNGLQDVEYSSILSSCSTLNEFEQKYLNSILSSKQEIIQG
ECCCCCEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVVDKTLVGRYLMYITIDRHNIVSDEYDGDIEYIISNTTPTLSTKGTTLPRNGINIVTPE
HHHHHHHHCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCC
SAKLWFRFVKKNNEQFNLKVTVPPDSEGKIKVAGFFYDNIYIPIKLKVEKFSKLFYFGLA
HHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEEECCEEEEEEEEHHHHHHHHHHHHH
KNAALKKVFSILAILYITLYGIYFLLGVVKVTAYDLLIRCSKIIVIAALFNESSQHIFYD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHCCCCCEEEHH
TLFPMFDGGINSLISYAVKTTASDVDNPFKFFDLVVSRYIDVNFLKIILIEIVNIHNGLT
HHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHH
ILGILTLWSIMKFVTIMVKVCMELLMSMIAIAILVGLAPMFIVFILFDRTAEIFKRWLSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLNTLMPVIMIIFILIINELMLVAVEAAFPEIRICWGTLFDIELNLDLSAIGLPTAFSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCEEEECCCCHHCC
PLMAVPFYNVVFIGGNLFNAMDLGNSFAGSLAGVFLLYNLVLLAGTLVGSQVFTKGINRK
CEEECCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GMSYVKSIMMQLLS
HHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]