| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183660
Identifier: 189183660
GI number: 189183660
Start: 780290
End: 781279
Strand: Reverse
Name: 189183660
Synonym: OTT_0753
Alternate gene names: NA
Gene position: 781279-780290 (Counterclockwise)
Preceding gene: 189183668
Following gene: 189183653
Centisome position: 38.89
GC content: 32.42
Gene sequence:
>990_bases ATGAATAATTATTTACGGCTTCGCGCTCACCTACTATATGTTACTACAAGAAGTATTTTTAGTCATACAAATAGTAATCC TTTACTTTATGCTGCTAAACACAACTACCTAGATGTAGTAAAGCATCTGATAGAACATGGTGTAGATATCAATACACAAA ATCTACGTGGAAGCACTGCATTACATATTGCTGCTTATAACGGCAACATACAAATGGGAATGTTTTTGTTAGCTAATCAT GCTGAGGTAGATACACAAAATGTATATAGCAATACTGCTTTATATTATGCTGTTGAACAAAGTAACATTGAGATGGCAAG TATTTTATTAAGTTATGGAGCTAATCCTAATTTTCAATGCCACTTTAATGTGACTCCTTTTGAAATAGCTTGGGTCAAAT ATATTGATAATCCGGAGCTACATTTCGAAATGATGAAATTATTAGTTACTAACATTGTTAAGACAGAACATTGTAACGCT GTAGATACTAATTTACCAGGTTTTTTACACAATAAAGGGCTTATTAATGAATCAGAACAGCTAAAGGAACTTGAACAGCA ATGTCATAACGAAATAGAAGAAATGATGTCTATCTCTGTTGGTGAAAATGGCAAATCTTTTTTTGATATATTTGTACTGC AAAAAGATATAAATACGCTAGCAAGATGTGCTAATAATCCTGATATTGTACTGTGTCAGGATAAATTTTTCATGTACTCT TCCTTTATTGAAAAATCTATTAAAGAAGGGAAAGCAAGAGCTAAGATGTTACAAGGAGCAGTTGAATCAATAGATGAGAT ATTTGAATCCAATCAGGATGCTAATCAAAAAAGTCAGATATCTTGGCTTCACTTGCCACTAGAAGTAAGGATGATGATAT TGGAGAATTTAAGTAATACTGATTTAACAAAACTTCAACATAATGACACAGCAGAAGCTGATGCTGAAGCTGAACTTGAA GGAGCATATGCTATATATGAGGAAGAATAG
Upstream 100 bases:
>100_bases ATCAATTTTAAGTTGCAATATCACTCAGTTAATGAATAATATCCTTGCGTTTTATGTACAATAATCTTTGACAGTATAAT ATAATTTTGGGGAAAGAATT
Downstream 100 bases:
>100_bases CAGATATCAAAGCTCTCTGTATCATTGGTTATTGTAAATCGCTTGTTCCATACTGAGGTGCAGCCATAGTAGCTAAAATA GACGAAAAGTTAGATAAAAA
Product: ankyrin repeat-containing protein 01_02
Products: NA
Alternate protein names: Ankyrin Repeat-Containing ; Ankyrin; Ankyrin Repeat Domain Protein; Ankyrin Domain Protein; Pfs Nacht And Ankyrin Domain Protein
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MNNYLRLRAHLLYVTTRSIFSHTNSNPLLYAAKHNYLDVVKHLIEHGVDINTQNLRGSTALHIAAYNGNIQMGMFLLANH AEVDTQNVYSNTALYYAVEQSNIEMASILLSYGANPNFQCHFNVTPFEIAWVKYIDNPELHFEMMKLLVTNIVKTEHCNA VDTNLPGFLHNKGLINESEQLKELEQQCHNEIEEMMSISVGENGKSFFDIFVLQKDINTLARCANNPDIVLCQDKFFMYS SFIEKSIKEGKARAKMLQGAVESIDEIFESNQDANQKSQISWLHLPLEVRMMILENLSNTDLTKLQHNDTAEADAEAELE GAYAIYEEE
Sequences:
>Translated_329_residues MNNYLRLRAHLLYVTTRSIFSHTNSNPLLYAAKHNYLDVVKHLIEHGVDINTQNLRGSTALHIAAYNGNIQMGMFLLANH AEVDTQNVYSNTALYYAVEQSNIEMASILLSYGANPNFQCHFNVTPFEIAWVKYIDNPELHFEMMKLLVTNIVKTEHCNA VDTNLPGFLHNKGLINESEQLKELEQQCHNEIEEMMSISVGENGKSFFDIFVLQKDINTLARCANNPDIVLCQDKFFMYS SFIEKSIKEGKARAKMLQGAVESIDEIFESNQDANQKSQISWLHLPLEVRMMILENLSNTDLTKLQHNDTAEADAEAELE GAYAIYEEE >Mature_329_residues MNNYLRLRAHLLYVTTRSIFSHTNSNPLLYAAKHNYLDVVKHLIEHGVDINTQNLRGSTALHIAAYNGNIQMGMFLLANH AEVDTQNVYSNTALYYAVEQSNIEMASILLSYGANPNFQCHFNVTPFEIAWVKYIDNPELHFEMMKLLVTNIVKTEHCNA VDTNLPGFLHNKGLINESEQLKELEQQCHNEIEEMMSISVGENGKSFFDIFVLQKDINTLARCANNPDIVLCQDKFFMYS SFIEKSIKEGKARAKMLQGAVESIDEIFESNQDANQKSQISWLHLPLEVRMMILENLSNTDLTKLQHNDTAEADAEAELE GAYAIYEEE
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI87239981, Length=112, Percent_Identity=32.1428571428571, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI70780357, Length=104, Percent_Identity=33.6538461538462, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI70780359, Length=104, Percent_Identity=33.6538461538462, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI215598574, Length=104, Percent_Identity=33.6538461538462, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI70780353, Length=104, Percent_Identity=33.6538461538462, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI13376842, Length=106, Percent_Identity=31.1320754716981, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI70780355, Length=104, Percent_Identity=33.6538461538462, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI17864094, Length=92, Percent_Identity=36.9565217391304, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI24233530, Length=111, Percent_Identity=37.8378378378378, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI32967601, Length=123, Percent_Identity=34.9593495934959, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI52426737, Length=135, Percent_Identity=34.0740740740741, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI188595682, Length=135, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI52426735, Length=131, Percent_Identity=34.3511450381679, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI46519154, Length=133, Percent_Identity=30.8270676691729, Blast_Score=66, Evalue=5e-11, Organism=Homo sapiens, GI46519151, Length=133, Percent_Identity=30.8270676691729, Blast_Score=66, Evalue=5e-11, Organism=Caenorhabditis elegans, GI25145251, Length=135, Percent_Identity=29.6296296296296, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17542700, Length=135, Percent_Identity=29.6296296296296, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71981389, Length=135, Percent_Identity=29.6296296296296, Blast_Score=68, Evalue=7e-12, Organism=Caenorhabditis elegans, GI71981414, Length=135, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71981411, Length=135, Percent_Identity=29.6296296296296, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17540144, Length=94, Percent_Identity=37.2340425531915, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI161078304, Length=112, Percent_Identity=33.9285714285714, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI281359521, Length=107, Percent_Identity=36.4485981308411, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI281359519, Length=107, Percent_Identity=36.4485981308411, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI28558752, Length=107, Percent_Identity=36.4485981308411, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI28558750, Length=107, Percent_Identity=36.4485981308411, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI28558756, Length=107, Percent_Identity=36.4485981308411, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI28558754, Length=107, Percent_Identity=36.4485981308411, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI28571867, Length=135, Percent_Identity=31.1111111111111, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI28571865, Length=135, Percent_Identity=31.1111111111111, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37504; Mature: 37504
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNYLRLRAHLLYVTTRSIFSHTNSNPLLYAAKHNYLDVVKHLIEHGVDINTQNLRGSTA CCCEEEEEEEEEEEEHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEE LHIAAYNGNIQMGMFLLANHAEVDTQNVYSNTALYYAVEQSNIEMASILLSYGANPNFQC EEEEEECCCEEEEEEEEECCCCCCCHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCEEE HFNVTPFEIAWVKYIDNPELHFEMMKLLVTNIVKTEHCNAVDTNLPGFLHNKGLINESEQ EEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH LKELEQQCHNEIEEMMSISVGENGKSFFDIFVLQKDINTLARCANNPDIVLCQDKFFMYS HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCEEEECCHHHHHH SFIEKSIKEGKARAKMLQGAVESIDEIFESNQDANQKSQISWLHLPLEVRMMILENLSNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCCCC DLTKLQHNDTAEADAEAELEGAYAIYEEE CCHHCCCCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MNNYLRLRAHLLYVTTRSIFSHTNSNPLLYAAKHNYLDVVKHLIEHGVDINTQNLRGSTA CCCEEEEEEEEEEEEHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEE LHIAAYNGNIQMGMFLLANHAEVDTQNVYSNTALYYAVEQSNIEMASILLSYGANPNFQC EEEEEECCCEEEEEEEEECCCCCCCHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCEEE HFNVTPFEIAWVKYIDNPELHFEMMKLLVTNIVKTEHCNAVDTNLPGFLHNKGLINESEQ EEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH LKELEQQCHNEIEEMMSISVGENGKSFFDIFVLQKDINTLARCANNPDIVLCQDKFFMYS HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCEEEECCHHHHHH SFIEKSIKEGKARAKMLQGAVESIDEIFESNQDANQKSQISWLHLPLEVRMMILENLSNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCCCC DLTKLQHNDTAEADAEAELEGAYAIYEEE CCHHCCCCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA