| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
Click here to switch to the map view.
The map label for this gene is 189183623
Identifier: 189183623
GI number: 189183623
Start: 737626
End: 737982
Strand: Reverse
Name: 189183623
Synonym: OTT_0716
Alternate gene names: NA
Gene position: 737982-737626 (Counterclockwise)
Preceding gene: 189183627
Following gene: 189183622
Centisome position: 36.73
GC content: 34.45
Gene sequence:
>357_bases ATGGTGGATATTTTGAGGAAAGCTGATTGTCTTAAGAAATCAAAAGGTGGGCGTAAAAATAAGCTTAATTTGGAGGAACA GTTGCTGATGGTGTTAGAATACCTTAGAGAATACCGCACTTATTTCCATATATGCCAGAACTATGGGATTAGTGAAAGTT CAGCATATAAAGCTGTAAAATGGGTAGAAGACACCCTAGTTAAACACCTAAACTTTGCTCTTACAGGTCGTAAAGCTATA ATGAAGAGTGATATGAATTATGAAGTGGTCTTGATTGATGCTACTGAGACTCCTATAGAAAGACATAAAAAAAACAAAAA TTCTATTATTCAGGAAAGAAGAAAAGGCATACACTAA
Upstream 100 bases:
>100_bases GATCTGATTTGAGGTAATAATGAAATTCGATCAGATTAAAGAGTTATAGGATGAAAAATTTTGTCGATTAACAGGAGTAA GGAAGGGAACATTTTCAAAG
Downstream 100 bases:
>100_bases AAACTCAAATAGTGCTAGACAAGAAAACGCACCAAGTAATATGTACAGATTTTTCTAACGGTAAAAAACACGACTCTAGA TTATTTAAGGAATCCAAAAT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MVDILRKADCLKKSKGGRKNKLNLEEQLLMVLEYLREYRTYFHICQNYGISESSAYKAVKWVEDTLVKHLNFALTGRKAI MKSDMNYEVVLIDATETPIERHKKNKNSIIQERRKGIH
Sequences:
>Translated_118_residues MVDILRKADCLKKSKGGRKNKLNLEEQLLMVLEYLREYRTYFHICQNYGISESSAYKAVKWVEDTLVKHLNFALTGRKAI MKSDMNYEVVLIDATETPIERHKKNKNSIIQERRKGIH >Mature_118_residues MVDILRKADCLKKSKGGRKNKLNLEEQLLMVLEYLREYRTYFHICQNYGISESSAYKAVKWVEDTLVKHLNFALTGRKAI MKSDMNYEVVLIDATETPIERHKKNKNSIIQERRKGIH
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 13886; Mature: 13886
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDILRKADCLKKSKGGRKNKLNLEEQLLMVLEYLREYRTYFHICQNYGISESSAYKAVK CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH WVEDTLVKHLNFALTGRKAIMKSDMNYEVVLIDATETPIERHKKNKNSIIQERRKGIH HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure MVDILRKADCLKKSKGGRKNKLNLEEQLLMVLEYLREYRTYFHICQNYGISESSAYKAVK CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH WVEDTLVKHLNFALTGRKAIMKSDMNYEVVLIDATETPIERHKKNKNSIIQERRKGIH HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1662761 [H]