| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183593
Identifier: 189183593
GI number: 189183593
Start: 713589
End: 713729
Strand: Reverse
Name: 189183593
Synonym: OTT_0686
Alternate gene names: NA
Gene position: 713729-713589 (Counterclockwise)
Preceding gene: 189183598
Following gene: 189183592
Centisome position: 35.53
GC content: 34.75
Gene sequence:
>141_bases TTGCTTGCATGCCCATTGGCTGAAGCTAGTGTTTCTGCTCAAAATGAAATTGCTGAATTTCTGAAAAGTGATGAAAATTT ACCAGCTGAAAGTATCCTTCAAGTCTTGATGCTTGGTAGTAATAATATCGAACATTTTTAA
Upstream 100 bases:
>100_bases TAAGTATTTTGATCGAGAAAGATTTTCTAAACACTTTGTCTATGAATCATATGATGATGAGACTCAGCTATTCTTTAATC GTGGTTCAATAGGCTTTGTA
Downstream 100 bases:
>100_bases GCAACTGGCAGTTGTATCGTAAAGGAGAGATATTTATTGAGTTAGCAAATAAAAGAACAGAGTTTTTGCGTAATCAAGCT CAAAAATCAGGCTCTATAAA
Product: putative conjugative transfer protein TraC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 46; Mature: 46
Protein sequence:
>46_residues MLACPLAEASVSAQNEIAEFLKSDENLPAESILQVLMLGSNNIEHF
Sequences:
>Translated_46_residues MLACPLAEASVSAQNEIAEFLKSDENLPAESILQVLMLGSNNIEHF >Mature_46_residues MLACPLAEASVSAQNEIAEFLKSDENLPAESILQVLMLGSNNIEHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4989; Mature: 4989
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLACPLAEASVSAQNEIAEFLKSDENLPAESILQVLMLGSNNIEHF CCCCCCCCHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLACPLAEASVSAQNEIAEFLKSDENLPAESILQVLMLGSNNIEHF CCCCCCCCHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA