Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183565

Identifier: 189183565

GI number: 189183565

Start: 689191

End: 689598

Strand: Reverse

Name: 189183565

Synonym: OTT_0658

Alternate gene names: NA

Gene position: 689598-689191 (Counterclockwise)

Preceding gene: 189183568

Following gene: 189183564

Centisome position: 34.33

GC content: 31.13

Gene sequence:

>408_bases
TTGCCATTATTTATCTATTATTTTTTATACTCTTTTCATATTAGCATATTATGTACCCATTTCCTACGTTCGTGCTATAG
CTCAAATGTAAATAATTTAAAGTATTATCAGCCATTTCAAGGAGAAAAGATTCTTATAGCTGCAAATAATGATAAACAAA
ATAAAGAATATGTAAGCACTATAAACGAGGCTGTAAAAGTACTGACAAGCAAAGGAGCAATTACTAGCATCGTAATTCAT
TCAGAAGGTGAAGATTTTAACGAAATGCTAAAAAATAAAGGAGCCACAGCTGTTAAGGAGCTTATGATACCTGAAATCAT
GAAGTTAATTAATACTCAGAACGTAAAAACAGAGTCTAAACAAGTGGTGAAAACTAACATAGCTCCAAAAATTGGAGTTA
GACGGTAG

Upstream 100 bases:

>100_bases
GTATTACGACTTATATTGAATATTTTACATGCTTTAACAATTGATAGCCCCTCATCTAGGGCTTTGAATAGCTTCATTCT
TAAATCGTAACTGTAACTTC

Downstream 100 bases:

>100_bases
TGCTGAAGATTTGAAATTGAATGTAAGCTATTCATTCACAGAGCAAATTACAAAATGAGCTATACATAAACAGCTCACAG
TGATGTTTGTAATTCGCATT

Product: putative conjugative transfer protein TraA

Products: NA

Alternate protein names: MobA/MobL Family Protein; Conjugal Transfer Protein TraA; Conjugative Transfer Protein TraI

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MPLFIYYFLYSFHISILCTHFLRSCYSSNVNNLKYYQPFQGEKILIAANNDKQNKEYVSTINEAVKVLTSKGAITSIVIH
SEGEDFNEMLKNKGATAVKELMIPEIMKLINTQNVKTESKQVVKTNIAPKIGVRR

Sequences:

>Translated_135_residues
MPLFIYYFLYSFHISILCTHFLRSCYSSNVNNLKYYQPFQGEKILIAANNDKQNKEYVSTINEAVKVLTSKGAITSIVIH
SEGEDFNEMLKNKGATAVKELMIPEIMKLINTQNVKTESKQVVKTNIAPKIGVRR
>Mature_134_residues
PLFIYYFLYSFHISILCTHFLRSCYSSNVNNLKYYQPFQGEKILIAANNDKQNKEYVSTINEAVKVLTSKGAITSIVIHS
EGEDFNEMLKNKGATAVKELMIPEIMKLINTQNVKTESKQVVKTNIAPKIGVRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15409; Mature: 15278

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLFIYYFLYSFHISILCTHFLRSCYSSNVNNLKYYQPFQGEKILIAANNDKQNKEYVST
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHH
INEAVKVLTSKGAITSIVIHSEGEDFNEMLKNKGATAVKELMIPEIMKLINTQNVKTESK
HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHH
QVVKTNIAPKIGVRR
HHHHHCCCCCCCCCC
>Mature Secondary Structure 
PLFIYYFLYSFHISILCTHFLRSCYSSNVNNLKYYQPFQGEKILIAANNDKQNKEYVST
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHH
INEAVKVLTSKGAITSIVIHSEGEDFNEMLKNKGATAVKELMIPEIMKLINTQNVKTESK
HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHH
QVVKTNIAPKIGVRR
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA