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The map label for this gene is hscB [H]

Identifier: 189183477

GI number: 189183477

Start: 583616

End: 584119

Strand: Reverse

Name: hscB [H]

Synonym: OTT_0570

Alternate gene names: 189183477

Gene position: 584119-583616 (Counterclockwise)

Preceding gene: 189183478

Following gene: 189183476

Centisome position: 29.08

GC content: 27.58

Gene sequence:

>504_bases
ATGATAAATTATTTTCAACTATTGAATTTGTATGAAACTTTTAGTTTAGCATTGGAAGATATTGAAGATAATTATTTTCA
GTTACAGCTAAAGTATCATCCTGACCAGGTTAAAAGCTTTGAAGAAAAAAATAAATATTTACAAATATCCAGTAATTTAA
ATCTAGCATATAAAACATTAAAATGTCCATATGCTCGCGCTGAACATATTCTAAACCTGCACGGAATAGATTTAACTGCT
CCAAATCTTAAGTCAGTAATAAGCATTGATTTTTTGGAAAACGTTTTTTCATTGCAAACTAGGTTAAATGCTATTAATAC
TGTTACTGAATTAAAAAAATTACAGAACATTTTAAACGTATCTTATAATAACACTACTACAGAGCTAGAGTCTTTACTTG
CTAGCAGAAATTATGAGGCAGCAACAGTAAAAACAATGGAATTAAAGTATTGGGTGAACTTAATAAATATTACAAATCAT
AAGCTAAGAGATGCCTCTAATTAA

Upstream 100 bases:

>100_bases
TATTGAAGGCAAATTCAATTCAGGATTTGAATTCAGTAATCCTAATGAAAAACATCGCTGTGGTTGTGGTAAATCTGCAA
ATTTTTAATTATTTTCAACT

Downstream 100 bases:

>100_bases
CATTGAAGAACCTCAAAATCAATCAATTCATAGTTCAGAGATTGTAATTGGTATTGATTTTGGCACTACTAACTCTTTAG
TAGCTCATTCGATTAATAGT

Product: co-chaperone HscB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MINYFQLLNLYETFSLALEDIEDNYFQLQLKYHPDQVKSFEEKNKYLQISSNLNLAYKTLKCPYARAEHILNLHGIDLTA
PNLKSVISIDFLENVFSLQTRLNAINTVTELKKLQNILNVSYNNTTTELESLLASRNYEAATVKTMELKYWVNLINITNH
KLRDASN

Sequences:

>Translated_167_residues
MINYFQLLNLYETFSLALEDIEDNYFQLQLKYHPDQVKSFEEKNKYLQISSNLNLAYKTLKCPYARAEHILNLHGIDLTA
PNLKSVISIDFLENVFSLQTRLNAINTVTELKKLQNILNVSYNNTTTELESLLASRNYEAATVKTMELKYWVNLINITNH
KLRDASN
>Mature_167_residues
MINYFQLLNLYETFSLALEDIEDNYFQLQLKYHPDQVKSFEEKNKYLQISSNLNLAYKTLKCPYARAEHILNLHGIDLTA
PNLKSVISIDFLENVFSLQTRLNAINTVTELKKLQNILNVSYNNTTTELESLLASRNYEAATVKTMELKYWVNLINITNH
KLRDASN

Specific function: Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward hscA [H]

COG id: COG1076

COG function: function code O; DnaJ-domain-containing proteins 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001623
- InterPro:   IPR009073
- InterPro:   IPR004640 [H]

Pfam domain/function: PF00226 DnaJ; PF07743 HSCB_C [H]

EC number: NA

Molecular weight: Translated: 19439; Mature: 19439

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINYFQLLNLYETFSLALEDIEDNYFQLQLKYHPDQVKSFEEKNKYLQISSNLNLAYKTL
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHCCCEEEEECCCCEEEEEC
KCPYARAEHILNLHGIDLTAPNLKSVISIDFLENVFSLQTRLNAINTVTELKKLQNILNV
CCCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SYNNTTTELESLLASRNYEAATVKTMELKYWVNLINITNHKLRDASN
CCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHEEHHCCCCCCCCCCC
>Mature Secondary Structure
MINYFQLLNLYETFSLALEDIEDNYFQLQLKYHPDQVKSFEEKNKYLQISSNLNLAYKTL
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHCCCEEEEECCCCEEEEEC
KCPYARAEHILNLHGIDLTAPNLKSVISIDFLENVFSLQTRLNAINTVTELKKLQNILNV
CCCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SYNNTTTELESLLASRNYEAATVKTMELKYWVNLINITNHKLRDASN
CCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHEEHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA