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The map label for this gene is traA [H]

Identifier: 189183458

GI number: 189183458

Start: 568910

End: 570208

Strand: Reverse

Name: traA [H]

Synonym: OTT_0551

Alternate gene names: 189183458

Gene position: 570208-568910 (Counterclockwise)

Preceding gene: 189183460

Following gene: 189183457

Centisome position: 28.38

GC content: 33.18

Gene sequence:

>1299_bases
ATGGCTATACAGTTTACAAGGATTGAATTTTTAACTAGAAGTAAAGGAGGTGATAGTTGTCGTAAGGCAGCTTATAATGC
AAGAACTATTGTTGAAAACGAGAAGACAGGTATAAAGTATAACTTCTCTCGTAAGAAAGATAACGTATATCATACAGTGC
TGATACCGGATTATATAAATCAAGAATTCAAGAATATTCAAACATTAATGAATGAGGTAGAACGAACCGCAAAAAACCAA
AAAAACAGCCAGTTGTTGAAGGATATAGTAATAGCATTGCCAGACGAGAAGGAGCTAAATTTAGAGCATAGAATAGAAAT
AACTCATCAAATAGTTGATGCGATGGAATGGGTGCAAAATGGTCTTGGAGTACAGATAGATATTCATAAGCCTCATACAG
GAGATAAAAACTGGCATGCACATATATTGCTTACTATAAGAAGATTTAGAGAAGATGGAACTGGTTTAGGAGATATAGCA
GTAGATTTAAACCCAAAAATTATAACATTAAGTAATGGCAAAAAGGTTGTTATTAAAGATCCAGAGATGATTCATGAAAT
AGTAAAAGACATAATTAATGCATATTTCGCTAAATTAGGCTTACCATATAGAGTTGACGAGATAAGCGAAGTGCCTGGAG
AGCATATGGGGCGTATTAAAATTAGGAGTTTAATTAATAAAGTAGTAAATGAAAATGAGTTACGTAAAGAGGCTCATTTG
AAGATTATTAATGATGCTGACGTAATAACAGATTCTATAACACATTACAAATCTATTTTTACTAAGCAGGATATTGAAAA
AGCAGTAAAAGATATACCAGATCTAACAGCAAGAGAACAGTTAGTTCAGCAAGTGCTTAGTTCAAATAGAATACTAGAGT
TATACCATGATGATGGTGAAAGTAGCAAATATTTTACGACAATTGAGGTTCGAAATGAGGAGACGAGAATAATCAGAATA
GCTAATAAAATCAATGATCAGGTTTATTACAACGATATTTACAATCTTAAAAGTGATATCGAAGGTCTAGCAAATGTTAG
TGAAGAACAGAAACAAGCTCTAAGGCATATTTTGCTTAGCACTAGTGGAGTTAGAGTCTTGAGAGGAAGAGCTGGTACAG
GAAAATCTTATGTTTTAATAAAAGCGCATAAGCTCGCAACAAATCGTAGACAAAAAGTTATTGGTCTTGCTCCTACTCAT
AAGGCAGTATCAGAGCTGAGGAGCAAAGGTTATACAGAGGTCTATACAGTAAAAGGATTTTTGTATAATCGAAAAAAAAT
TTTATGCAAGGCAGCTTAA

Upstream 100 bases:

>100_bases
GTACTCATTAACCGATTGAATGTTAAAAAAAAAGAAGTTTATGCTAGCAAAATCAAAAAAACCATGCTAACTTAAAACTC
AGGTGAGAATTGGTATTGAG

Downstream 100 bases:

>100_bases
TAGTAGTAGATGAAGCTGGAATGGTAGGTACTAAAGCTTATGCAGAGCTGTTTAGAGTAGTTAGAAACAATAATTGTCAA
CTGATACTTGCTGGAGATGA

Product: putative conjugative transfer protein TraA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MAIQFTRIEFLTRSKGGDSCRKAAYNARTIVENEKTGIKYNFSRKKDNVYHTVLIPDYINQEFKNIQTLMNEVERTAKNQ
KNSQLLKDIVIALPDEKELNLEHRIEITHQIVDAMEWVQNGLGVQIDIHKPHTGDKNWHAHILLTIRRFREDGTGLGDIA
VDLNPKIITLSNGKKVVIKDPEMIHEIVKDIINAYFAKLGLPYRVDEISEVPGEHMGRIKIRSLINKVVNENELRKEAHL
KIINDADVITDSITHYKSIFTKQDIEKAVKDIPDLTAREQLVQQVLSSNRILELYHDDGESSKYFTTIEVRNEETRIIRI
ANKINDQVYYNDIYNLKSDIEGLANVSEEQKQALRHILLSTSGVRVLRGRAGTGKSYVLIKAHKLATNRRQKVIGLAPTH
KAVSELRSKGYTEVYTVKGFLYNRKKILCKAA

Sequences:

>Translated_432_residues
MAIQFTRIEFLTRSKGGDSCRKAAYNARTIVENEKTGIKYNFSRKKDNVYHTVLIPDYINQEFKNIQTLMNEVERTAKNQ
KNSQLLKDIVIALPDEKELNLEHRIEITHQIVDAMEWVQNGLGVQIDIHKPHTGDKNWHAHILLTIRRFREDGTGLGDIA
VDLNPKIITLSNGKKVVIKDPEMIHEIVKDIINAYFAKLGLPYRVDEISEVPGEHMGRIKIRSLINKVVNENELRKEAHL
KIINDADVITDSITHYKSIFTKQDIEKAVKDIPDLTAREQLVQQVLSSNRILELYHDDGESSKYFTTIEVRNEETRIIRI
ANKINDQVYYNDIYNLKSDIEGLANVSEEQKQALRHILLSTSGVRVLRGRAGTGKSYVLIKAHKLATNRRQKVIGLAPTH
KAVSELRSKGYTEVYTVKGFLYNRKKILCKAA
>Mature_431_residues
AIQFTRIEFLTRSKGGDSCRKAAYNARTIVENEKTGIKYNFSRKKDNVYHTVLIPDYINQEFKNIQTLMNEVERTAKNQK
NSQLLKDIVIALPDEKELNLEHRIEITHQIVDAMEWVQNGLGVQIDIHKPHTGDKNWHAHILLTIRRFREDGTGLGDIAV
DLNPKIITLSNGKKVVIKDPEMIHEIVKDIINAYFAKLGLPYRVDEISEVPGEHMGRIKIRSLINKVVNENELRKEAHLK
IINDADVITDSITHYKSIFTKQDIEKAVKDIPDLTAREQLVQQVLSSNRILELYHDDGESSKYFTTIEVRNEETRIIRIA
NKINDQVYYNDIYNLKSDIEGLANVSEEQKQALRHILLSTSGVRVLRGRAGTGKSYVLIKAHKLATNRRQKVIGLAPTHK
AVSELRSKGYTEVYTVKGFLYNRKKILCKAA

Specific function: traI Has Been Identified As DNA Helicase I And It Also Has An Additional Activity Of Site-Specific Nicking At Orit. DNA Helicase I Is A Potent DNA-Dependent ATPase. [C]

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mobA/mobL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000606
- InterPro:   IPR005053
- InterPro:   IPR014136 [H]

Pfam domain/function: PF03389 MobA_MobL; PF01443 Viral_helicase1 [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 49514; Mature: 49382

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIQFTRIEFLTRSKGGDSCRKAAYNARTIVENEKTGIKYNFSRKKDNVYHTVLIPDYIN
CCEEEEEHHHHHCCCCCCHHHHHHCCCHHEEECCCCCEEEEECCCCCCEEEEEECCHHHH
QEFKNIQTLMNEVERTAKNQKNSQLLKDIVIALPDEKELNLEHRIEITHQIVDAMEWVQN
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GLGVQIDIHKPHTGDKNWHAHILLTIRRFREDGTGLGDIAVDLNPKIITLSNGKKVVIKD
CCCEEEEEECCCCCCCCCEEEEEHHHHHHHHCCCCCCEEEEECCCEEEEECCCCEEEEEC
PEMIHEIVKDIINAYFAKLGLPYRVDEISEVPGEHMGRIKIRSLINKVVNENELRKEAHL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHCHHHHHHHHHHHHCHHHHHHHHCE
KIINDADVITDSITHYKSIFTKQDIEKAVKDIPDLTAREQLVQQVLSSNRILELYHDDGE
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCC
SSKYFTTIEVRNEETRIIRIANKINDQVYYNDIYNLKSDIEGLANVSEEQKQALRHILLS
CCEEEEEEEEECCCCEEEEEEHHHCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
TSGVRVLRGRAGTGKSYVLIKAHKLATNRRQKVIGLAPTHKAVSELRSKGYTEVYTVKGF
CCCCEEEECCCCCCCEEEEEEEHHHHCCCHHEEEEECCCHHHHHHHHHCCCCEEEEEEHE
LYNRKKILCKAA
EECCCEEEEECC
>Mature Secondary Structure 
AIQFTRIEFLTRSKGGDSCRKAAYNARTIVENEKTGIKYNFSRKKDNVYHTVLIPDYIN
CEEEEEHHHHHCCCCCCHHHHHHCCCHHEEECCCCCEEEEECCCCCCEEEEEECCHHHH
QEFKNIQTLMNEVERTAKNQKNSQLLKDIVIALPDEKELNLEHRIEITHQIVDAMEWVQN
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GLGVQIDIHKPHTGDKNWHAHILLTIRRFREDGTGLGDIAVDLNPKIITLSNGKKVVIKD
CCCEEEEEECCCCCCCCCEEEEEHHHHHHHHCCCCCCEEEEECCCEEEEECCCCEEEEEC
PEMIHEIVKDIINAYFAKLGLPYRVDEISEVPGEHMGRIKIRSLINKVVNENELRKEAHL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHCHHHHHHHHHHHHCHHHHHHHHCE
KIINDADVITDSITHYKSIFTKQDIEKAVKDIPDLTAREQLVQQVLSSNRILELYHDDGE
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCC
SSKYFTTIEVRNEETRIIRIANKINDQVYYNDIYNLKSDIEGLANVSEEQKQALRHILLS
CCEEEEEEEEECCCCEEEEEEHHHCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
TSGVRVLRGRAGTGKSYVLIKAHKLATNRRQKVIGLAPTHKAVSELRSKGYTEVYTVKGF
CCCCEEEECCCCCCCEEEEEEEHHHHCCCHHEEEEECCCHHHHHHHHHCCCCEEEEEEHE
LYNRKKILCKAA
EECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides; In phosphorus-containing anhydrides [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]