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The map label for this gene is yobU [H]

Identifier: 189183436

GI number: 189183436

Start: 551084

End: 551587

Strand: Reverse

Name: yobU [H]

Synonym: OTT_0529

Alternate gene names: 189183436

Gene position: 551587-551084 (Counterclockwise)

Preceding gene: 189183437

Following gene: 189183435

Centisome position: 27.46

GC content: 35.32

Gene sequence:

>504_bases
ATGAATATGCAAAAAACAACGACAACACTAACGGAACTAAAATTGGTCGGCATAACTACGAGAACCAATAATGCTCAAAT
TTTTGAAAGAGATCCTTCGACTAATAAAATTGCAGCTACAGTTCAGAAATATTTTCACAATGGATTAGCCGAAAAGATCA
AAGATAGAAAAAATCACGGAACAACCTTCTGCGTTTATACCAATTACGAAAGCGATGTAAATTGTGATTACACGTATTTT
ATTGGTGAAGAAGTGGCTTCTTTTGAAGAGATAGATAAAGAATTTGAGACGCTTACAATACCTGCCCAACATTATGCAAA
ACTCACGAATCAGCCAGGGCCAATGCTAACCGTGTGCATCGATATGTGGCAAAACATATGGAAAATGAATGCATCTGATT
TAGGTAGTGAAAGAGCTTATATTGCAGACTTTGAAGTTTATGATGAACGCAGTATCGATCATACCAATGTGACACTCGAT
ATTTATATTGGGATTAAAAAATGA

Upstream 100 bases:

>100_bases
AAATCCAGGAGTGCTGAGTTTGGTCAGTCATTCCATTTTGGAAACAACTACAAAAAAATACTCAATGGTTCAAAATATCT
GATTAAATATTAAGGAGTAA

Downstream 100 bases:

>100_bases
GCCTTGAGCACACATCAACTCCCGCAAGCGCAGATATCGATTTTCTGACACAAAAAATCAATCAAGAAACACCTGAATTT
GGTGAAGCCCATCCTTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MNMQKTTTTLTELKLVGITTRTNNAQIFERDPSTNKIAATVQKYFHNGLAEKIKDRKNHGTTFCVYTNYESDVNCDYTYF
IGEEVASFEEIDKEFETLTIPAQHYAKLTNQPGPMLTVCIDMWQNIWKMNASDLGSERAYIADFEVYDERSIDHTNVTLD
IYIGIKK

Sequences:

>Translated_167_residues
MNMQKTTTTLTELKLVGITTRTNNAQIFERDPSTNKIAATVQKYFHNGLAEKIKDRKNHGTTFCVYTNYESDVNCDYTYF
IGEEVASFEEIDKEFETLTIPAQHYAKLTNQPGPMLTVCIDMWQNIWKMNASDLGSERAYIADFEVYDERSIDHTNVTLD
IYIGIKK
>Mature_167_residues
MNMQKTTTTLTELKLVGITTRTNNAQIFERDPSTNKIAATVQKYFHNGLAEKIKDRKNHGTTFCVYTNYESDVNCDYTYF
IGEEVASFEEIDKEFETLTIPAQHYAKLTNQPGPMLTVCIDMWQNIWKMNASDLGSERAYIADFEVYDERSIDHTNVTLD
IYIGIKK

Specific function: Unknown

COG id: COG3708

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010499
- InterPro:   IPR011256 [H]

Pfam domain/function: PF06445 AraC_E_bind [H]

EC number: NA

Molecular weight: Translated: 19244; Mature: 19244

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMQKTTTTLTELKLVGITTRTNNAQIFERDPSTNKIAATVQKYFHNGLAEKIKDRKNHG
CCCCHHHHHEEEEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TTFCVYTNYESDVNCDYTYFIGEEVASFEEIDKEFETLTIPAQHYAKLTNQPGPMLTVCI
CEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHEEEECHHHHHHHCCCCCCHHHHHH
DMWQNIWKMNASDLGSERAYIADFEVYDERSIDHTNVTLDIYIGIKK
HHHHHHHCCCHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MNMQKTTTTLTELKLVGITTRTNNAQIFERDPSTNKIAATVQKYFHNGLAEKIKDRKNHG
CCCCHHHHHEEEEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TTFCVYTNYESDVNCDYTYFIGEEVASFEEIDKEFETLTIPAQHYAKLTNQPGPMLTVCI
CEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHEEEECHHHHHHHCCCCCCHHHHHH
DMWQNIWKMNASDLGSERAYIADFEVYDERSIDHTNVTLDIYIGIKK
HHHHHHHCCCHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]