| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183349
Identifier: 189183349
GI number: 189183349
Start: 462954
End: 463997
Strand: Reverse
Name: 189183349
Synonym: OTT_0442
Alternate gene names: NA
Gene position: 463997-462954 (Counterclockwise)
Preceding gene: 189183351
Following gene: 189183346
Centisome position: 23.1
GC content: 29.02
Gene sequence:
>1044_bases ATGAATACTATGTCTCACATGTTAGCTATTTTGAATTATAGTGGATATGCTGCTTATACTAAATTAGCTCATGGTGCTAA ACTATCTAAGCAGTCTATGTATAAAGATAGTATTTTTATTAAAGGAACAAGTATTAGCTTTCCATGTGATAATATTAGAA GATTATTATCTATAAACGAATCGATTAATCATAGCATATGGTTAGAAAAACTAAAGTTATCATCTGGATTAGCTGACTGT AACAATAATTGTATGATTGGTTTCTATTCATCTAGTTCATTAATTTGGATTGAGAATGCTGATAATTTTCATCTATTAAC AAATAATCAAATTATTTCTCAATCAGCTTTTTCTGCTCCGATAATAAATTCATTATCTAGTGTTAATTTTTGCCGTCAAA CAAAGGCAACTTCTTTTTCATCTTATGCACTACATGATTTAGAACTATGGTCTTTAATACGTGGCAATGTTTTAATAAAA ATAAAGAATGTATTAAAAGGCATAAAAAATATACAGCCTCTACAGCCTTTAGAATGGAAGGCCTTTGGAGCATTTATGGA TATGTTTTTTGTTGAACTTAGCCGTAATCCAGCTACCTTAATTACTTTGCCTATGTGTTTCGACATATATAATCATCTAA CTGATGATAAAAATAAACCTCATTTAAACGAATTTATTAATAAAAATAGTTTATATCCAGAAAGACCAAATCACGAAGTT CTGCGGTGTATACTAACAGAATATTTTCCAATGTCTATGACAGGGGCTCTACATGTTAGCATACACTTCTCTAATATAAT AGAGCAAGTATTAAAAGAGAATAAATTAGATAAATATTGTTACTCTTATGATCTACGTGATGGAGATGCTCCATCATATT TGTATATAAGTAAGTTTATTACTATTGAAAAAAGACTTATAAAGGCATATCAATATTTTATTAGCAAGTTTAATGATGAC GTATATTCTTTTGCAGAATCGCTAGATAACTTGCTTGTTAGTTGGTATGGCAGTGATTGTAATATTGGTGGTTTATGCTC TTAG
Upstream 100 bases:
>100_bases TTGTTAGTTTTAAATAAAATTACTTTGCTCAAATTTAACTGCAAGCAATAATATAAACATTTATGTGATTATATTATTTA TAGGAGATTATTATTAATCG
Downstream 100 bases:
>100_bases GAAATAGCGAATAATGCTGGTAATAATAATGGTATGGATACAACAATAGGCATTGCAAACAGTATATATGCATTATATGA GTAGAAGTATTAGCAATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MNTMSHMLAILNYSGYAAYTKLAHGAKLSKQSMYKDSIFIKGTSISFPCDNIRRLLSINESINHSIWLEKLKLSSGLADC NNNCMIGFYSSSSLIWIENADNFHLLTNNQIISQSAFSAPIINSLSSVNFCRQTKATSFSSYALHDLELWSLIRGNVLIK IKNVLKGIKNIQPLQPLEWKAFGAFMDMFFVELSRNPATLITLPMCFDIYNHLTDDKNKPHLNEFINKNSLYPERPNHEV LRCILTEYFPMSMTGALHVSIHFSNIIEQVLKENKLDKYCYSYDLRDGDAPSYLYISKFITIEKRLIKAYQYFISKFNDD VYSFAESLDNLLVSWYGSDCNIGGLCS
Sequences:
>Translated_347_residues MNTMSHMLAILNYSGYAAYTKLAHGAKLSKQSMYKDSIFIKGTSISFPCDNIRRLLSINESINHSIWLEKLKLSSGLADC NNNCMIGFYSSSSLIWIENADNFHLLTNNQIISQSAFSAPIINSLSSVNFCRQTKATSFSSYALHDLELWSLIRGNVLIK IKNVLKGIKNIQPLQPLEWKAFGAFMDMFFVELSRNPATLITLPMCFDIYNHLTDDKNKPHLNEFINKNSLYPERPNHEV LRCILTEYFPMSMTGALHVSIHFSNIIEQVLKENKLDKYCYSYDLRDGDAPSYLYISKFITIEKRLIKAYQYFISKFNDD VYSFAESLDNLLVSWYGSDCNIGGLCS >Mature_347_residues MNTMSHMLAILNYSGYAAYTKLAHGAKLSKQSMYKDSIFIKGTSISFPCDNIRRLLSINESINHSIWLEKLKLSSGLADC NNNCMIGFYSSSSLIWIENADNFHLLTNNQIISQSAFSAPIINSLSSVNFCRQTKATSFSSYALHDLELWSLIRGNVLIK IKNVLKGIKNIQPLQPLEWKAFGAFMDMFFVELSRNPATLITLPMCFDIYNHLTDDKNKPHLNEFINKNSLYPERPNHEV LRCILTEYFPMSMTGALHVSIHFSNIIEQVLKENKLDKYCYSYDLRDGDAPSYLYISKFITIEKRLIKAYQYFISKFNDD VYSFAESLDNLLVSWYGSDCNIGGLCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39685; Mature: 39685
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTMSHMLAILNYSGYAAYTKLAHGAKLSKQSMYKDSIFIKGTSISFPCDNIRRLLSINE CCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCC SINHSIWLEKLKLSSGLADCNNNCMIGFYSSSSLIWIENADNFHLLTNNQIISQSAFSAP CCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEECCCCHHHHHCCCH IINSLSSVNFCRQTKATSFSSYALHDLELWSLIRGNVLIKIKNVLKGIKNIQPLQPLEWK HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCCHH AFGAFMDMFFVELSRNPATLITLPMCFDIYNHLTDDKNKPHLNEFINKNSLYPERPNHEV HHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHH LRCILTEYFPMSMTGALHVSIHFSNIIEQVLKENKLDKYCYSYDLRDGDAPSYLYISKFI HHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHCCHHHHHEEECCCCCCCCCEEHHHHHH TIEKRLIKAYQYFISKFNDDVYSFAESLDNLLVSWYGSDCNIGGLCS HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEHHCCCCCCCCCCCC >Mature Secondary Structure MNTMSHMLAILNYSGYAAYTKLAHGAKLSKQSMYKDSIFIKGTSISFPCDNIRRLLSINE CCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCC SINHSIWLEKLKLSSGLADCNNNCMIGFYSSSSLIWIENADNFHLLTNNQIISQSAFSAP CCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEECCCCHHHHHCCCH IINSLSSVNFCRQTKATSFSSYALHDLELWSLIRGNVLIKIKNVLKGIKNIQPLQPLEWK HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCCHH AFGAFMDMFFVELSRNPATLITLPMCFDIYNHLTDDKNKPHLNEFINKNSLYPERPNHEV HHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHH LRCILTEYFPMSMTGALHVSIHFSNIIEQVLKENKLDKYCYSYDLRDGDAPSYLYISKFI HHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHCCHHHHHEEECCCCCCCCCEEHHHHHH TIEKRLIKAYQYFISKFNDDVYSFAESLDNLLVSWYGSDCNIGGLCS HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA