Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183340

Identifier: 189183340

GI number: 189183340

Start: 452468

End: 453115

Strand: Reverse

Name: 189183340

Synonym: OTT_0433

Alternate gene names: NA

Gene position: 453115-452468 (Counterclockwise)

Preceding gene: 189183342

Following gene: 189183336

Centisome position: 22.55

GC content: 30.56

Gene sequence:

>648_bases
TTGTTTACCAAAAGCTATAGTAGGATAATACAACTGTGGCCTAGAATGTTGCTACCATTAGCCATATTAATGCATTATCT
GAAAGGAGAAGAGACTGGTATATATTACATCGATGCTACAAAGTTAACAATTTGTCATAATAAACGTACCTCCAGCAATA
GAGTTTTTAACAAAATTTCTAAAATTGGTAAAAGTAGTTATGGCTTGTTCTTAGACTTTAAGCTTCATCTTATAATCAAT
AATAAAGGCGAAATAATGTCAGTTAAAATTACTAAAGGCAATAAAAGCGGTCTATCTATAGCCTCAGTTATTTCTGAAGG
CCTATCTAGTAAATTGTTTGGTGATAAAGCTTACATATCTAAAGAGTTATTTCATCAACTGCTGACCAATGGTCTACGTT
TATTTACTAATCTTCGTAAAGATATGAAAACATATTTATTGGACATACAAGATAATCGATTATTAAATAAACGTTCTTTA
ATTGAGTCTGTCTTTAATGTACTAAAAAAACATATGCATTTAGAGCATACTCGACATCGCTCTCCTCTTAATTTCTTTGT
TCATATAATTGCTTATCTTGCTAGTTATTCTATCTCTAAACTTAATCCCCATCTTATCTCTTTTTCTTCTCCTGACTCCT
TATCCTAA

Upstream 100 bases:

>100_bases
GCATAATCATAATTGTACATTATCTCTTGTAGACCTTTTGTATTAGGTCTTTCATACTTTTTCTTATCCTAAACTGACGT
CATAAGTATAAAGGATACTT

Downstream 100 bases:

>100_bases
ATTGACGTTTGATAATGTTGATAATAGAATAGTAGTAGAATATTTAGTACGTAAAAGTAAAGGATTGCTATTTGCTGATG
GTGGATTTATTAGTTAAAAA

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MFTKSYSRIIQLWPRMLLPLAILMHYLKGEETGIYYIDATKLTICHNKRTSSNRVFNKISKIGKSSYGLFLDFKLHLIIN
NKGEIMSVKITKGNKSGLSIASVISEGLSSKLFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDNRLLNKRSL
IESVFNVLKKHMHLEHTRHRSPLNFFVHIIAYLASYSISKLNPHLISFSSPDSLS

Sequences:

>Translated_215_residues
MFTKSYSRIIQLWPRMLLPLAILMHYLKGEETGIYYIDATKLTICHNKRTSSNRVFNKISKIGKSSYGLFLDFKLHLIIN
NKGEIMSVKITKGNKSGLSIASVISEGLSSKLFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDNRLLNKRSL
IESVFNVLKKHMHLEHTRHRSPLNFFVHIIAYLASYSISKLNPHLISFSSPDSLS
>Mature_215_residues
MFTKSYSRIIQLWPRMLLPLAILMHYLKGEETGIYYIDATKLTICHNKRTSSNRVFNKISKIGKSSYGLFLDFKLHLIIN
NKGEIMSVKITKGNKSGLSIASVISEGLSSKLFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDNRLLNKRSL
IESVFNVLKKHMHLEHTRHRSPLNFFVHIIAYLASYSISKLNPHLISFSSPDSLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24734; Mature: 24734

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTKSYSRIIQLWPRMLLPLAILMHYLKGEETGIYYIDATKLTICHNKRTSSNRVFNKIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECEEEEEEECCCCCHHHHHHHHH
KIGKSSYGLFLDFKLHLIINNKGEIMSVKITKGNKSGLSIASVISEGLSSKLFGDKAYIS
HHCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHH
KELFHQLLTNGLRLFTNLRKDMKTYLLDIQDNRLLNKRSLIESVFNVLKKHMHLEHTRHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPLNFFVHIIAYLASYSISKLNPHLISFSSPDSLS
CHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC
>Mature Secondary Structure
MFTKSYSRIIQLWPRMLLPLAILMHYLKGEETGIYYIDATKLTICHNKRTSSNRVFNKIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECEEEEEEECCCCCHHHHHHHHH
KIGKSSYGLFLDFKLHLIINNKGEIMSVKITKGNKSGLSIASVISEGLSSKLFGDKAYIS
HHCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHH
KELFHQLLTNGLRLFTNLRKDMKTYLLDIQDNRLLNKRSLIESVFNVLKKHMHLEHTRHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPLNFFVHIIAYLASYSISKLNPHLISFSSPDSLS
CHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA