| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183270
Identifier: 189183270
GI number: 189183270
Start: 369981
End: 370457
Strand: Direct
Name: 189183270
Synonym: OTT_0363
Alternate gene names: NA
Gene position: 369981-370457 (Clockwise)
Preceding gene: 189183269
Following gene: 189183271
Centisome position: 18.42
GC content: 29.77
Gene sequence:
>477_bases ATGTCTAGCGGTAACTTAACTAGTACTGAAGTAAGAAATGTAGAATTTTTACTAGAAAAACATTTAAATCTAATAGATGA AAACTCAAAGTGTGCTAATAATTTAGCAGAGATGCTTTTTCAAAAAAAATTCTATAAAGAATATCGTCAATTTGATATGA TTTATACTGAATTTCACAGGTTGCAAAGTGGTCAATCTATTGGACATTATGGAAGTAGGGTTTACCATGATATTCATGTA TTAGTTGCAAAGATATTAATAAAATTTGGAATTGATTTACAAAAATATGAATCATACGTTGAAAATTTAGCATCTGTACA TGATAGCCTTATTCCATTATTGTGCCGGCAAATCAATCCAGAAGATTATAAATCATACTTTGAAGGCCTACCTAATAATG TTAAGGAGCTATTGAAGTCGGAGCTTCCTGCTGAAGAGAATTCAGAACCTTATGATGTATTAGAAAGTATTAGATAG
Upstream 100 bases:
>100_bases TATACAGAGAAATTTAGTACAGTCTGCAGAATGGTTTATTAAAAACTTTCAACTTAATCAAAATGAGATAGCAGAAAGCC TTATAGAAGGTACTATCAGA
Downstream 100 bases:
>100_bases CGATGATGAGTCAGACTATAATATTACAATAGATCCATATGATGTATTTATTAATCACAGAATATATAGCAAAATACAAG ATGCATTCATATTGGAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSSGNLTSTEVRNVEFLLEKHLNLIDENSKCANNLAEMLFQKKFYKEYRQFDMIYTEFHRLQSGQSIGHYGSRVYHDIHV LVAKILIKFGIDLQKYESYVENLASVHDSLIPLLCRQINPEDYKSYFEGLPNNVKELLKSELPAEENSEPYDVLESIR
Sequences:
>Translated_158_residues MSSGNLTSTEVRNVEFLLEKHLNLIDENSKCANNLAEMLFQKKFYKEYRQFDMIYTEFHRLQSGQSIGHYGSRVYHDIHV LVAKILIKFGIDLQKYESYVENLASVHDSLIPLLCRQINPEDYKSYFEGLPNNVKELLKSELPAEENSEPYDVLESIR >Mature_157_residues SSGNLTSTEVRNVEFLLEKHLNLIDENSKCANNLAEMLFQKKFYKEYRQFDMIYTEFHRLQSGQSIGHYGSRVYHDIHVL VAKILIKFGIDLQKYESYVENLASVHDSLIPLLCRQINPEDYKSYFEGLPNNVKELLKSELPAEENSEPYDVLESIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18467; Mature: 18336
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGNLTSTEVRNVEFLLEKHLNLIDENSKCANNLAEMLFQKKFYKEYRQFDMIYTEFHR CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQSGQSIGHYGSRVYHDIHVLVAKILIKFGIDLQKYESYVENLASVHDSLIPLLCRQINP HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH EDYKSYFEGLPNNVKELLKSELPAEENSEPYDVLESIR HHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHCCC >Mature Secondary Structure SSGNLTSTEVRNVEFLLEKHLNLIDENSKCANNLAEMLFQKKFYKEYRQFDMIYTEFHR CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQSGQSIGHYGSRVYHDIHVLVAKILIKFGIDLQKYESYVENLASVHDSLIPLLCRQINP HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH EDYKSYFEGLPNNVKELLKSELPAEENSEPYDVLESIR HHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA