Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183266

Identifier: 189183266

GI number: 189183266

Start: 367385

End: 367942

Strand: Direct

Name: 189183266

Synonym: OTT_0359

Alternate gene names: NA

Gene position: 367385-367942 (Clockwise)

Preceding gene: 189183265

Following gene: 189183269

Centisome position: 18.29

GC content: 30.11

Gene sequence:

>558_bases
ATGATTGACAAAATCAATGATTCAAATAATTTCAATAACATTCATAATTCAAAAACAGAGATAGAAAATTCTAAAGCTAA
CAGCTTGAACCACAACGTAGCTATAAAGTTGATAAATGGTGATATTGCTGATGGTATAGTGCTACTTAGTGATAATAATA
GCTTGAGAGCTGATAATACTCTAAAAGAATCAATAAACCAATTAATCAATGATTGGAAGAATAGTAAATTTGAGCTGCAG
GATCGTTTGATAATTGCTGACCATAAAGAAGCTGAAAATATTAATCAAAACATCAGAAACTACATGAAGGAAAATGGTGC
TCTGAAAGGTCCAGAATACAGCATTTTAATTTCAGGAGCTGAATCAAAAAAATATGCTAACTACATGGCTGGAGACCGAA
TTGTATTTCAAACAAACTATAAGGATTTACAAATACAAAACAGTGAATTTGCAACTCTAGTATCAATTGATGAAAATAAG
TTTGTAGCTAAGACAGATATAGGAAACGAGGTAAGCTTTGATTTAAATAAAATAAGCTTTAAACATGGATATGTGTGA

Upstream 100 bases:

>100_bases
ATTCCAATAATCACCTAGCAATAAAATTATAATTCAAACGGTAAAAATAGCAAATATTTATACCGCAAAACAATTTAGTG
ACGCGAAGGCGAGGTTTTAT

Downstream 100 bases:

>100_bases
GTAGACCTAACCAATCGCTCAATTAGGCCCCTCCTCAGAACCGGACTTGCAGAATTACCGCATTCTGGCTCTCAAAAATA
AGATAAGCATTATGCCTTAT

Product: putative conjugative transfer protein TraI

Products: NA

Alternate protein names: Conjugative Transfer Protein TraI; MobA/MobL Family Protein; Conjugal Transfer Protein TraA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MIDKINDSNNFNNIHNSKTEIENSKANSLNHNVAIKLINGDIADGIVLLSDNNSLRADNTLKESINQLINDWKNSKFELQ
DRLIIADHKEAENINQNIRNYMKENGALKGPEYSILISGAESKKYANYMAGDRIVFQTNYKDLQIQNSEFATLVSIDENK
FVAKTDIGNEVSFDLNKISFKHGYV

Sequences:

>Translated_185_residues
MIDKINDSNNFNNIHNSKTEIENSKANSLNHNVAIKLINGDIADGIVLLSDNNSLRADNTLKESINQLINDWKNSKFELQ
DRLIIADHKEAENINQNIRNYMKENGALKGPEYSILISGAESKKYANYMAGDRIVFQTNYKDLQIQNSEFATLVSIDENK
FVAKTDIGNEVSFDLNKISFKHGYV
>Mature_185_residues
MIDKINDSNNFNNIHNSKTEIENSKANSLNHNVAIKLINGDIADGIVLLSDNNSLRADNTLKESINQLINDWKNSKFELQ
DRLIIADHKEAENINQNIRNYMKENGALKGPEYSILISGAESKKYANYMAGDRIVFQTNYKDLQIQNSEFATLVSIDENK
FVAKTDIGNEVSFDLNKISFKHGYV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20957; Mature: 20957

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDKINDSNNFNNIHNSKTEIENSKANSLNHNVAIKLINGDIADGIVLLSDNNSLRADNT
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCHH
LKESINQLINDWKNSKFELQDRLIIADHKEAENINQNIRNYMKENGALKGPEYSILISGA
HHHHHHHHHHHHCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
ESKKYANYMAGDRIVFQTNYKDLQIQNSEFATLVSIDENKFVAKTDIGNEVSFDLNKISF
CCCHHHHHCCCCEEEEEECCCEEEEECCCEEEEEEECCCCEEEECCCCCCEEEEHEEEEE
KHGYV
CCCCC
>Mature Secondary Structure
MIDKINDSNNFNNIHNSKTEIENSKANSLNHNVAIKLINGDIADGIVLLSDNNSLRADNT
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCHH
LKESINQLINDWKNSKFELQDRLIIADHKEAENINQNIRNYMKENGALKGPEYSILISGA
HHHHHHHHHHHHCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
ESKKYANYMAGDRIVFQTNYKDLQIQNSEFATLVSIDENKFVAKTDIGNEVSFDLNKISF
CCCHHHHHCCCCEEEEEECCCEEEEECCCEEEEEEECCCCEEEECCCCCCEEEEHEEEEE
KHGYV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA