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The map label for this gene is ntrY [C]

Identifier: 189183209

GI number: 189183209

Start: 314220

End: 315797

Strand: Reverse

Name: ntrY [C]

Synonym: OTT_0302

Alternate gene names: 189183209

Gene position: 315797-314220 (Counterclockwise)

Preceding gene: 189183210

Following gene: 189183208

Centisome position: 15.72

GC content: 28.2

Gene sequence:

>1578_bases
ATGGCTACTAACAATAAAATATCAACTTCATTCAAAAAAACAGTAGTCTTATATTGCATTTATAGCCTAATTCCACTGCT
TAATGCAGTATACTTCTTTATTGTTTTTTTTACTCAAGATTATATTACCTATAACTCTAGATCTATCAGTTATTCTTTAT
TATTAGATTTTACATCTTTATTAATTATCATAATATTACTAGCTAAAGTAGTATGGAAATACTTAAGATATAATGTTAAA
ACAGTGGCAGAAAGGTTACAACAAAAAGTTGCAGTGACTTTTAGTATAACTGCTGTAGTACCAATAATTGCGCTTGCAGT
ATTGTTTATATTCTTTTTTAACTTTACTATTCAAAATTACTTTGACAAATATATTAACAAAATTTGCTATGCATCAACAA
TTAGCAAGCTTTATTTACAGAGCAAAGCTAACGATCAAAGTACAATGTCAAATATAACCAATGAGCTAACTAGCAAGAAA
ATAGCAAAACTACACACTAACAGGCTTTTACACTTTTTAAAACATAAAGAATTTATAGATTATCTAACTAACAATTTTGA
TTCTAATCAAGAATATATTAAGCTAAAACATCGACTAATTTTACTACAAGTAAAATGCTTAATTGCTTTTCTCTGTATTG
CTTTATTAATGCTACTAATAGCAATTCATATGAGCTTGATCTTAGCAAATAGAATTTTTCTACCGGTTACAGAATTATTA
GTTACTGCGACTAAATCTATTAAACTAGCAAAGTTAAATATTCAATTAAAGCACACAAATGTTGAGAATGAATTAGATTT
TCTAACTTCTGTATTTAACCAAATGATAAAGCAATTAGAATATCAAAACAAAGATTTAACAATAACGCAGAGAACATTAG
TTTGGTCTGATATAGCAAGAAAAGTAGCTCATGAAATTAATAATCCACTTACTCCTATACAGCTATCTGCTAGTATGCTA
GCAGATAAATTTGGCAAAGAAGTAAGTGATACTATTATGTTTACAAAGTATCTAAACATTATCTCAAGGCATGCTAAAGA
TATTGAAACAATTATTAAAGAATTTGCTGATTTTGCTAAAATACCAGTTCCTAAGTTTACTAACTGCGATCTAGTTGCAG
TGATCAAAGGGTTAGTTGAATCAAGGCAAATAATCAATGAAAAAATACAGTATAAGTTTATTAGTACACTCAGCAAACTA
GATTTTGTAGCAGATGTTACTCAAATTCATCAAATTATTGCAAACTTATTAAACAATGCTGAAGAATCTTTGGAATCTAA
GTTTCATTCTACTAAAATAATTAAAATATTCTTACAACAACCTGTTTTCGAAATTGTAACTATTGAGGTTCAAGATACTG
GCAATGGATTCTCTCCAGATTTAATTAACTATATTACTGAGCCATATGTTACAACACGCTTACGAGGTAGTGGCTTAGGA
CTTTCTATTGTAAAAAAAATTGTTGAAGATCACTTTGGTACATTACAAATTCGAAATCTACCAAATGGAGGAGCAGCAGT
TCAAATTATATTTGACAATTTAAAATTGCAAGCCTGTCTTAATCGAGGTTATGAGTAG

Upstream 100 bases:

>100_bases
AGCTTCAGCTATAAATAAAAAAAATTCAATATATCATTAAAAATATTGCTTAATATTAATAGTTGATAAAAATATTAATA
ACTTTAAATTAGTTAAAAAT

Downstream 100 bases:

>100_bases
CATAGCACTAATTTTTATCAATTTTATAGTTAAAATAATTATTTCTTATTGATTTATCTAGAATAGAGTACTAATTTAAG
ATTATAAGCAAATTTTAGTT

Product: nitrogen regulation protein NtrY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MATNNKISTSFKKTVVLYCIYSLIPLLNAVYFFIVFFTQDYITYNSRSISYSLLLDFTSLLIIIILLAKVVWKYLRYNVK
TVAERLQQKVAVTFSITAVVPIIALAVLFIFFFNFTIQNYFDKYINKICYASTISKLYLQSKANDQSTMSNITNELTSKK
IAKLHTNRLLHFLKHKEFIDYLTNNFDSNQEYIKLKHRLILLQVKCLIAFLCIALLMLLIAIHMSLILANRIFLPVTELL
VTATKSIKLAKLNIQLKHTNVENELDFLTSVFNQMIKQLEYQNKDLTITQRTLVWSDIARKVAHEINNPLTPIQLSASML
ADKFGKEVSDTIMFTKYLNIISRHAKDIETIIKEFADFAKIPVPKFTNCDLVAVIKGLVESRQIINEKIQYKFISTLSKL
DFVADVTQIHQIIANLLNNAEESLESKFHSTKIIKIFLQQPVFEIVTIEVQDTGNGFSPDLINYITEPYVTTRLRGSGLG
LSIVKKIVEDHFGTLQIRNLPNGGAAVQIIFDNLKLQACLNRGYE

Sequences:

>Translated_525_residues
MATNNKISTSFKKTVVLYCIYSLIPLLNAVYFFIVFFTQDYITYNSRSISYSLLLDFTSLLIIIILLAKVVWKYLRYNVK
TVAERLQQKVAVTFSITAVVPIIALAVLFIFFFNFTIQNYFDKYINKICYASTISKLYLQSKANDQSTMSNITNELTSKK
IAKLHTNRLLHFLKHKEFIDYLTNNFDSNQEYIKLKHRLILLQVKCLIAFLCIALLMLLIAIHMSLILANRIFLPVTELL
VTATKSIKLAKLNIQLKHTNVENELDFLTSVFNQMIKQLEYQNKDLTITQRTLVWSDIARKVAHEINNPLTPIQLSASML
ADKFGKEVSDTIMFTKYLNIISRHAKDIETIIKEFADFAKIPVPKFTNCDLVAVIKGLVESRQIINEKIQYKFISTLSKL
DFVADVTQIHQIIANLLNNAEESLESKFHSTKIIKIFLQQPVFEIVTIEVQDTGNGFSPDLINYITEPYVTTRLRGSGLG
LSIVKKIVEDHFGTLQIRNLPNGGAAVQIIFDNLKLQACLNRGYE
>Mature_524_residues
ATNNKISTSFKKTVVLYCIYSLIPLLNAVYFFIVFFTQDYITYNSRSISYSLLLDFTSLLIIIILLAKVVWKYLRYNVKT
VAERLQQKVAVTFSITAVVPIIALAVLFIFFFNFTIQNYFDKYINKICYASTISKLYLQSKANDQSTMSNITNELTSKKI
AKLHTNRLLHFLKHKEFIDYLTNNFDSNQEYIKLKHRLILLQVKCLIAFLCIALLMLLIAIHMSLILANRIFLPVTELLV
TATKSIKLAKLNIQLKHTNVENELDFLTSVFNQMIKQLEYQNKDLTITQRTLVWSDIARKVAHEINNPLTPIQLSASMLA
DKFGKEVSDTIMFTKYLNIISRHAKDIETIIKEFADFAKIPVPKFTNCDLVAVIKGLVESRQIINEKIQYKFISTLSKLD
FVADVTQIHQIIANLLNNAEESLESKFHSTKIIKIFLQQPVFEIVTIEVQDTGNGFSPDLINYITEPYVTTRLRGSGLGL
SIVKKIVEDHFGTLQIRNLPNGGAAVQIIFDNLKLQACLNRGYE

Specific function: Member of the two-component regulatory system RC0948/RC0849 [H]

COG id: COG5000

COG function: function code T; Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=254, Percent_Identity=25.1968503937008, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1790436, Length=210, Percent_Identity=27.1428571428571, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1790300, Length=214, Percent_Identity=24.2990654205607, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 60163; Mature: 60031

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCEEEEEECCCCCCEEEEEEHHHHHHHHHCCCCC
>Mature Secondary Structure 
ATNNKISTSFKKTVVLYCIYSLIPLLNAVYFFIVFFTQDYITYNSRSISYSLLLDFTSL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH
LIIIILLAKVVWKYLRYNVKTVAERLQQKVAVTFSITAVVPIIALAVLFIFFFNFTIQNY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDKYINKICYASTISKLYLQSKANDQSTMSNITNELTSKKIAKLHTNRLLHFLKHKEFID
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLTNNFDSNQEYIKLKHRLILLQVKCLIAFLCIALLMLLIAIHMSLILANRIFLPVTELL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTATKSIKLAKLNIQLKHTNVENELDFLTSVFNQMIKQLEYQNKDLTITQRTLVWSDIAR
HHHHCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH
KVAHEINNPLTPIQLSASMLADKFGKEVSDTIMFTKYLNIISRHAKDIETIIKEFADFAK
HHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IPVPKFTNCDLVAVIKGLVESRQIINEKIQYKFISTLSKLDFVADVTQIHQIIANLLNNA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EESLESKFHSTKIIKIFLQQPVFEIVTIEVQDTGNGFSPDLINYITEPYVTTRLRGSGLG
HHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHCCCHHHEEECCCCCC
LSIVKKIVEDHFGTLQIRNLPNGGAAVQIIFDNLKLQACLNRGYE
HHHHHHHHHHCCCEEEEEECCCCCCEEEEEEHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]