| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is mreC [C]
Identifier: 189183204
GI number: 189183204
Start: 305751
End: 306602
Strand: Direct
Name: mreC [C]
Synonym: OTT_0297
Alternate gene names: 189183204
Gene position: 305751-306602 (Clockwise)
Preceding gene: 189183203
Following gene: 189183205
Centisome position: 15.22
GC content: 28.99
Gene sequence:
>852_bases ATGGCGCTTTTAGAAAATCGTTATAAGTACCAGAGCAAAAATATACTTAAACATTTAGTAACTGTATTAACAAAATTTCG CCTAGTTACAGCTATTTTTATAATTATCGTGTCTATATGCACAATGCATTTTTCTAATACTACACATGTTAAGGCTATTA TACTTGAAAATACAGGTCAAATACTTGAGACTTCTTTATCAGTTCTAAATTATATTAGTGATACCTATGCTAATTTATTG CAATATTTTAAATCACTGGATCAGTTAAAACGAGATAATGCTGAATTAAACTCAAGAATATCTTATTTACAAGATGTTGA GCAAAAACTAGTTATATTAAATGCTGAAAATCAAAGATTAAAAAATTTTATCAGCTTTAGTGGTGAAACGTTCAATAACT CAATTACTACAAGGCTATTATCAATTAGCTCTACACCTTATAATAAATTAGGAATTATATCAGCAGGATTGAATCAAGGT ATTGAGAAAAATAATGTTGTATATGATAATCATGGATTAATTGGCCGAGTAATTGAGGTAAGTAATAATTACTCTAAAAT TCTCCTTTTGGCTGATTCAAATTCAAAAATACCAGTAATATCTTCAATTTCTCAAGAAAGAGCTATCCTTGTTGGCGGAG GAAGTGATAACTATGCTGTAAAGCCTTTATATCTCGATGAAAATACTAAGGTCCAACTTGGAGAAATATTTGTTACATCA GGTGATGGGCAATATTATCCATATGGGATAGCAGTAGCTAAAGTAACTGCTATAAATAATGGAGATATTCACTTAACTTT ATGCTCTAATTTAAATAGAGTTGAGTTTGTCAAAGTGAAATTGTCTAGTTAA
Upstream 100 bases:
>100_bases TGCTGAAAATCCTTTATTTTGCGTAGCTTTGGGAAGCGGTGAAATCTTAGAAGACTTTGATAGATTAAAGCATGTACTGT TTAAACAGCACTAATTTTTT
Downstream 100 bases:
>100_bases TATTATAGTAACCAAGGTTTGGAATATAGTAAATTATGTTGAATTAGATATGGTGATGAGATAGTCTGAAGTGCAAATAT CAACAAATAGCTTAATATAT
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: Rod Shape-Determining Protein; Cell Shape-Determining Protein; Rod Shape-Determining Protein Mrec; Rod Shape-Determining MreC Transmembrane Protein; Cell Shape-Determining Protein MreC; Rod Shape Determining Protein MreC; MreC Rod Shape-Determining Protein
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MALLENRYKYQSKNILKHLVTVLTKFRLVTAIFIIIVSICTMHFSNTTHVKAIILENTGQILETSLSVLNYISDTYANLL QYFKSLDQLKRDNAELNSRISYLQDVEQKLVILNAENQRLKNFISFSGETFNNSITTRLLSISSTPYNKLGIISAGLNQG IEKNNVVYDNHGLIGRVIEVSNNYSKILLLADSNSKIPVISSISQERAILVGGGSDNYAVKPLYLDENTKVQLGEIFVTS GDGQYYPYGIAVAKVTAINNGDIHLTLCSNLNRVEFVKVKLSS
Sequences:
>Translated_283_residues MALLENRYKYQSKNILKHLVTVLTKFRLVTAIFIIIVSICTMHFSNTTHVKAIILENTGQILETSLSVLNYISDTYANLL QYFKSLDQLKRDNAELNSRISYLQDVEQKLVILNAENQRLKNFISFSGETFNNSITTRLLSISSTPYNKLGIISAGLNQG IEKNNVVYDNHGLIGRVIEVSNNYSKILLLADSNSKIPVISSISQERAILVGGGSDNYAVKPLYLDENTKVQLGEIFVTS GDGQYYPYGIAVAKVTAINNGDIHLTLCSNLNRVEFVKVKLSS >Mature_282_residues ALLENRYKYQSKNILKHLVTVLTKFRLVTAIFIIIVSICTMHFSNTTHVKAIILENTGQILETSLSVLNYISDTYANLLQ YFKSLDQLKRDNAELNSRISYLQDVEQKLVILNAENQRLKNFISFSGETFNNSITTRLLSISSTPYNKLGIISAGLNQGI EKNNVVYDNHGLIGRVIEVSNNYSKILLLADSNSKIPVISSISQERAILVGGGSDNYAVKPLYLDENTKVQLGEIFVTSG DGQYYPYGIAVAKVTAINNGDIHLTLCSNLNRVEFVKVKLSS
Specific function: Involved In Formation Of The Rod Shape Of The Cell. May Also Contribute To Regulation Of Formation Of Penicillin-Binding Proteins. [C]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31563; Mature: 31431
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLENRYKYQSKNILKHLVTVLTKFRLVTAIFIIIVSICTMHFSNTTHVKAIILENTGQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCH ILETSLSVLNYISDTYANLLQYFKSLDQLKRDNAELNSRISYLQDVEQKLVILNAENQRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCHHHH KNFISFSGETFNNSITTRLLSISSTPYNKLGIISAGLNQGIEKNNVVYDNHGLIGRVIEV HHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEECCHHCCCCCCCEEEECCCCEEEEEEE SNNYSKILLLADSNSKIPVISSISQERAILVGGGSDNYAVKPLYLDENTKVQLGEIFVTS CCCCEEEEEEECCCCCCCEEECCCCCCEEEEECCCCCEEEEEEEECCCCEEEEEEEEEEC GDGQYYPYGIAVAKVTAINNGDIHLTLCSNLNRVEFVKVKLSS CCCCEEEEEEEEEEEEEECCCCEEEEECCCCCEEEEEEEEECC >Mature Secondary Structure ALLENRYKYQSKNILKHLVTVLTKFRLVTAIFIIIVSICTMHFSNTTHVKAIILENTGQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCH ILETSLSVLNYISDTYANLLQYFKSLDQLKRDNAELNSRISYLQDVEQKLVILNAENQRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCHHHH KNFISFSGETFNNSITTRLLSISSTPYNKLGIISAGLNQGIEKNNVVYDNHGLIGRVIEV HHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEECCHHCCCCCCCEEEECCCCEEEEEEE SNNYSKILLLADSNSKIPVISSISQERAILVGGGSDNYAVKPLYLDENTKVQLGEIFVTS CCCCEEEEEEECCCCCCCEEECCCCCCEEEEECCCCCEEEEEEEECCCCEEEEEEEEEEC GDGQYYPYGIAVAKVTAINNGDIHLTLCSNLNRVEFVKVKLSS CCCCEEEEEEEEEEEEEECCCCEEEEECCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA