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The map label for this gene is smf [H]

Identifier: 189183183

GI number: 189183183

Start: 277504

End: 278664

Strand: Direct

Name: smf [H]

Synonym: OTT_0276

Alternate gene names: 189183183

Gene position: 277504-278664 (Clockwise)

Preceding gene: 189183182

Following gene: 189183184

Centisome position: 13.81

GC content: 30.84

Gene sequence:

>1161_bases
ATGCTAAAAGTGCCAGTTAGTGATAATATTTCTACTGAGTATGATGATGAAACAATTTATACCCTGCGTTTAGCTAGAAG
TGAGAATGTTGGTCCTAAAACTTTTTTTGAGCTAATTAGATTATTTGGTAGCGCTAAAGTAGCTTTACAGAATGTTGCAG
ATTTTTCTCTTAAAGGAGGAAAGCGAAAGCCAATAAAAATCTACACTAACTCAGAAGCATTACAAGAAATAGAAGCGTTG
AGAAAATTCAATGCTTTTCTTCTTACTCATCATCATTCTGAATACTCAAAACTATTATTACATATTCCAGATCCTCCTCC
AGTCATTACCTATAAAGGAGATATTAAGTTACTCAATCATAAAATTCTTGCTGTAGTTGGATCTAGAAACGCTTCTTTAA
ATGGAGTAACTTTTACTAAAAACATTGTTAAAAAATTAGTTGATAACAAAATAGTTATAGTATCTGGCTTAGCTAGAGGA
ATAGATACTGCAGCACATCAATCAGCATTACCTAGTACTATTGCTGTAATAGCTGGTGGAGTTGATCATATTTACCCTCA
AGAAAATATTAATTTATATCATAAAATTGCTAATGAAGGACTTATTTTAGCTGAGTTGCCAATTTATTGCCCTCCTATCA
GTAAACATTTTCCTCAACGTAACAGAATTATTGCTGGAATATCATATGGAACCTTAGTTGTAGAAGCAAATTTAAAATCT
GGATCACTTATTACTGCTCGTTTAACACTTGAATATAATAGAGAACTATTTGCAGTTCCAGGTTTTCCATATGATCCAAG
ATATCAAGGCACTAATCATTTGATTAAAAATGGAGCTTATTTAGTAGAACAAGTTGAGGATATAATTGAACAACTTCCAA
CATATAATCTTGATACTAGTAATAATTGTTACGATCAAGAAAATTTTACACAATATAAAGACCATGGCAGCTATCAGTCT
ACTACTATCACTGATGATCAACGAACAATTGTAAAAAATATATTATCTTCAGTACCACTAGACATAGAAGTTATTGTTAA
CCAAACTAAATTACCAATGAATATAGTTAATGTCATCATCTTAGAACTTGAATTAGCTGGCATAGTTGCTCGTTGTTTAG
GTAACAAAATTGTTATTTTATACAATCAGAGTTTGATATAA

Upstream 100 bases:

>100_bases
GGAAGCAACATCAGATGGTGTATGTCACTACTTAACATCAAATGCTGAGAAGTTGTAATTTTAAGTTCCTTTTTGCAGTT
TATAAATTGCTACAGACTGT

Downstream 100 bases:

>100_bases
AAAATATTGCAAAACCTAATAAAAATAAGTGTTATATTTTTTGCCTATATATGTAGTTTAACAACGCTAGAATATGATAA
TGAAAGGTATATAAAAAGGG

Product: DNA processing protein Smf

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MLKVPVSDNISTEYDDETIYTLRLARSENVGPKTFFELIRLFGSAKVALQNVADFSLKGGKRKPIKIYTNSEALQEIEAL
RKFNAFLLTHHHSEYSKLLLHIPDPPPVITYKGDIKLLNHKILAVVGSRNASLNGVTFTKNIVKKLVDNKIVIVSGLARG
IDTAAHQSALPSTIAVIAGGVDHIYPQENINLYHKIANEGLILAELPIYCPPISKHFPQRNRIIAGISYGTLVVEANLKS
GSLITARLTLEYNRELFAVPGFPYDPRYQGTNHLIKNGAYLVEQVEDIIEQLPTYNLDTSNNCYDQENFTQYKDHGSYQS
TTITDDQRTIVKNILSSVPLDIEVIVNQTKLPMNIVNVIILELELAGIVARCLGNKIVILYNQSLI

Sequences:

>Translated_386_residues
MLKVPVSDNISTEYDDETIYTLRLARSENVGPKTFFELIRLFGSAKVALQNVADFSLKGGKRKPIKIYTNSEALQEIEAL
RKFNAFLLTHHHSEYSKLLLHIPDPPPVITYKGDIKLLNHKILAVVGSRNASLNGVTFTKNIVKKLVDNKIVIVSGLARG
IDTAAHQSALPSTIAVIAGGVDHIYPQENINLYHKIANEGLILAELPIYCPPISKHFPQRNRIIAGISYGTLVVEANLKS
GSLITARLTLEYNRELFAVPGFPYDPRYQGTNHLIKNGAYLVEQVEDIIEQLPTYNLDTSNNCYDQENFTQYKDHGSYQS
TTITDDQRTIVKNILSSVPLDIEVIVNQTKLPMNIVNVIILELELAGIVARCLGNKIVILYNQSLI
>Mature_386_residues
MLKVPVSDNISTEYDDETIYTLRLARSENVGPKTFFELIRLFGSAKVALQNVADFSLKGGKRKPIKIYTNSEALQEIEAL
RKFNAFLLTHHHSEYSKLLLHIPDPPPVITYKGDIKLLNHKILAVVGSRNASLNGVTFTKNIVKKLVDNKIVIVSGLARG
IDTAAHQSALPSTIAVIAGGVDHIYPQENINLYHKIANEGLILAELPIYCPPISKHFPQRNRIIAGISYGTLVVEANLKS
GSLITARLTLEYNRELFAVPGFPYDPRYQGTNHLIKNGAYLVEQVEDIIEQLPTYNLDTSNNCYDQENFTQYKDHGSYQS
TTITDDQRTIVKNILSSVPLDIEVIVNQTKLPMNIVNVIILELELAGIVARCLGNKIVILYNQSLI

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=308, Percent_Identity=34.4155844155844, Blast_Score=159, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 43046; Mature: 43046

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKVPVSDNISTEYDDETIYTLRLARSENVGPKTFFELIRLFGSAKVALQNVADFSLKGG
CEECCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
KRKPIKIYTNSEALQEIEALRKFNAFLLTHHHSEYSKLLLHIPDPPPVITYKGDIKLLNH
CCCCEEEEECHHHHHHHHHHHHHCCEEEEECCCCCEEEEEECCCCCCEEEECCCEEEECE
KILAVVGSRNASLNGVTFTKNIVKKLVDNKIVIVSGLARGIDTAAHQSALPSTIAVIAGG
EEEEEEECCCCCCCCEEEHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCHHHHHHCCC
VDHIYPQENINLYHKIANEGLILAELPIYCPPISKHFPQRNRIIAGISYGTLVVEANLKS
HHHCCCCCCCCEEEECCCCCEEEEECCCCCCCHHHHCCCCCCEEEEEEEEEEEEEECCCC
GSLITARLTLEYNRELFAVPGFPYDPRYQGTNHLIKNGAYLVEQVEDIIEQLPTYNLDTS
CCEEEEEEEEEECCEEEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
NNCYDQENFTQYKDHGSYQSTTITDDQRTIVKNILSSVPLDIEVIVNQTKLPMNIVNVII
CCCCCCCCCHHHHCCCCCCCCEECCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHH
LELELAGIVARCLGNKIVILYNQSLI
HHHHHHHHHHHHHCCEEEEEEECCCC
>Mature Secondary Structure
MLKVPVSDNISTEYDDETIYTLRLARSENVGPKTFFELIRLFGSAKVALQNVADFSLKGG
CEECCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
KRKPIKIYTNSEALQEIEALRKFNAFLLTHHHSEYSKLLLHIPDPPPVITYKGDIKLLNH
CCCCEEEEECHHHHHHHHHHHHHCCEEEEECCCCCEEEEEECCCCCCEEEECCCEEEECE
KILAVVGSRNASLNGVTFTKNIVKKLVDNKIVIVSGLARGIDTAAHQSALPSTIAVIAGG
EEEEEEECCCCCCCCEEEHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCHHHHHHCCC
VDHIYPQENINLYHKIANEGLILAELPIYCPPISKHFPQRNRIIAGISYGTLVVEANLKS
HHHCCCCCCCCEEEECCCCCEEEEECCCCCCCHHHHCCCCCCEEEEEEEEEEEEEECCCC
GSLITARLTLEYNRELFAVPGFPYDPRYQGTNHLIKNGAYLVEQVEDIIEQLPTYNLDTS
CCEEEEEEEEEECCEEEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
NNCYDQENFTQYKDHGSYQSTTITDDQRTIVKNILSSVPLDIEVIVNQTKLPMNIVNVII
CCCCCCCCCHHHHCCCCCCCCEECCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHH
LELELAGIVARCLGNKIVILYNQSLI
HHHHHHHHHHHHHCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]