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The map label for this gene is 189183161

Identifier: 189183161

GI number: 189183161

Start: 247713

End: 248063

Strand: Reverse

Name: 189183161

Synonym: OTT_0254

Alternate gene names: NA

Gene position: 248063-247713 (Counterclockwise)

Preceding gene: 189183164

Following gene: 189183160

Centisome position: 12.35

GC content: 30.2

Gene sequence:

>351_bases
ATGAATATTATAATCTCTGGCTCACCACAATACAATTCTGTTAAATTCAATTTAAATCAGTACGTTAATAGGAAGATCAT
TAATGTAGCTAACAAGTATTTTGATAATCTAAAGGCTCCAAATGTTCATTTCAGCAAAGAAGAACATAACCAGTTTAAAT
GTCATATTGTAGTTAATCCTATTACCAAACAGCACCGTATTATTAATAGTACAGGATACTCAAATGATGTCTTTGCAAGT
TTTGATCTTGCTCGTGTTAAATTAGAGCAGCAACTTAGACGATATAAATCCAAACTTAAAGATAAACATGCTAAAGTTAA
GATATCTCAGTCATGCAAACTAGGTGTTTAA

Upstream 100 bases:

>100_bases
ATAGATTTTATACAAAAAAATAATTTTTTAATAAAACTCTTTTCATATCTTGCTAATAATGATACAATTTAAATTATAAT
AGCATAAATAGGAGGAATTT

Downstream 100 bases:

>100_bases
AGTCAATCATATGTAGCTAAGCTAGTATCAGATGGTAAAATTATTCAAAATAATTTATTTTAGACATCTTTTGAAACTAT
GCATTATGGTTTAAAGTTAT

Product: probable sigma(54) modulation protein

Products: NA

Alternate protein names: Ribosome-Associated Factor Y

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MNIIISGSPQYNSVKFNLNQYVNRKIINVANKYFDNLKAPNVHFSKEEHNQFKCHIVVNPITKQHRIINSTGYSNDVFAS
FDLARVKLEQQLRRYKSKLKDKHAKVKISQSCKLGV

Sequences:

>Translated_116_residues
MNIIISGSPQYNSVKFNLNQYVNRKIINVANKYFDNLKAPNVHFSKEEHNQFKCHIVVNPITKQHRIINSTGYSNDVFAS
FDLARVKLEQQLRRYKSKLKDKHAKVKISQSCKLGV
>Mature_116_residues
MNIIISGSPQYNSVKFNLNQYVNRKIINVANKYFDNLKAPNVHFSKEEHNQFKCHIVVNPITKQHRIINSTGYSNDVFAS
FDLARVKLEQQLRRYKSKLKDKHAKVKISQSCKLGV

Specific function: Unknown

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13478; Mature: 13478

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIISGSPQYNSVKFNLNQYVNRKIINVANKYFDNLKAPNVHFSKEEHNQFKCHIVVNP
CEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECC
ITKQHRIINSTGYSNDVFASFDLARVKLEQQLRRYKSKLKDKHAKVKISQSCKLGV
CCCCCEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MNIIISGSPQYNSVKFNLNQYVNRKIINVANKYFDNLKAPNVHFSKEEHNQFKCHIVVNP
CEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECC
ITKQHRIINSTGYSNDVFASFDLARVKLEQQLRRYKSKLKDKHAKVKISQSCKLGV
CCCCCEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA