Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183155

Identifier: 189183155

GI number: 189183155

Start: 240017

End: 240409

Strand: Reverse

Name: 189183155

Synonym: OTT_0248

Alternate gene names: NA

Gene position: 240409-240017 (Counterclockwise)

Preceding gene: 189183156

Following gene: 189183154

Centisome position: 11.97

GC content: 29.77

Gene sequence:

>393_bases
ATGTCAGTTAAAATTACTAAAGGCAATAAAAGCGATCTATCTATAGCCTCAGTTATTTCTGAAGTCCTATCTGGTAAATT
GTTTGGTGATAAAGCTTACATATCTAAAGAGTTATTTCATCAACTGCTGACCAATGGTCTACGTTTATTTACTAATCTTC
GTAAAGATATGAAAACATATTTATTGGATATACAAGATAAGCTGTTATTAAATAAACGTTCTTTAATTGAGTCTGTCTTT
AATGTACTAAAAAAACATATGCATTTAGAGCATACTAAACACCGTTCTCCTCTTAATTTCTTTGTTCATATAATTGCTTC
TCTTGCTAGTTATTCTATCTCTAAACTTAATCCCCATCTTATCTCTTCTTTTTCTCCTGACTTCTTATCCTAA

Upstream 100 bases:

>100_bases
AAATAAAGATTCGGTCTTAGATTTAATTTGATCTCTGGCATTTATAATTTTGAACTACCTTAACCAGTTTCGAAAGAGGT
CTAATAATAAAGGCGAAATA

Downstream 100 bases:

>100_bases
ATTGACGTTTTAAATGACTAATCCAACTTTTTTCATTCTTGGCTAAGGAGTCATAAAAATGTATATTATTGTTTGTAACT
ATATTGTGATATATCTTCTT

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MSVKITKGNKSDLSIASVISEVLSGKLFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDKLLLNKRSLIESVF
NVLKKHMHLEHTKHRSPLNFFVHIIASLASYSISKLNPHLISSFSPDFLS

Sequences:

>Translated_130_residues
MSVKITKGNKSDLSIASVISEVLSGKLFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDKLLLNKRSLIESVF
NVLKKHMHLEHTKHRSPLNFFVHIIASLASYSISKLNPHLISSFSPDFLS
>Mature_129_residues
SVKITKGNKSDLSIASVISEVLSGKLFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDKLLLNKRSLIESVFN
VLKKHMHLEHTKHRSPLNFFVHIIASLASYSISKLNPHLISSFSPDFLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14813; Mature: 14681

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKITKGNKSDLSIASVISEVLSGKLFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTY
CCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDIQDKLLLNKRSLIESVFNVLKKHMHLEHTKHRSPLNFFVHIIASLASYSISKLNPHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHH
ISSFSPDFLS
HHCCCCCCCC
>Mature Secondary Structure 
SVKITKGNKSDLSIASVISEVLSGKLFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTY
CEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDIQDKLLLNKRSLIESVFNVLKKHMHLEHTKHRSPLNFFVHIIASLASYSISKLNPHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHH
ISSFSPDFLS
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA