| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is ctaQ [H]
Identifier: 189183149
GI number: 189183149
Start: 228229
End: 229719
Strand: Direct
Name: ctaQ [H]
Synonym: OTT_0242
Alternate gene names: 189183149
Gene position: 228229-229719 (Clockwise)
Preceding gene: 189183140
Following gene: 189183162
Centisome position: 11.36
GC content: 29.51
Gene sequence:
>1491_bases ATGAAAAATTATTTATTATTAGAAGAAGAAATCAAACAGGTAACTCGAATTAATAACATTATTACATTATTGTATTGGGA TCTTTCCACATGTATGCCAGTTAATGCTGGTACAAGTAGAGGAGAAGATATTGCTAGTCTAACTACAATAGTATATGACA TATTAAGGTCAGATAAAATTTTTGATCTTATAGCTAGAGCTAAAGAAGAAATACCTCAGCTTGATCAATGGCAAACTGCT AATCTAGCATTAATTGAAAAAAAAGCTATAGAAAGTAGATGTATAGATTATAGTCTACAGAAAAAATATATACTTGCAGC AACTCAAGGAGAATTAGTATGGAGACAAGCCAAAAAAGAAAATAATTATGAACTATTTAAGCCTTATTTACAGCAAATAC TAAACTGCGTTAAGGAAATAGCCAGCATTAAATCTAAAATGCTTAACTGTACTATGTATGATAGTTTGATCGATATATAT GACTATGGCAGAAAAGCAACTGAGATCAAAGAAATTTTTTCTGCTATAAAGAAAACAATACCTAATTTAATTCATAAAAT AGTTGAAAAGCAACGAAAAGAAGTAATTTTACCTATTACTAATAAAGTTAGTATTGCAAAACAAGAGCAAATTTGCAAAA GAATTATGCAAATTTTAGGTTTTGATTTCACTAAGGGTAGACTTGATCAATCAGCTCATCCATTTTGCCGTGGTATGTTT GATGATATCAGACTAACAACAAGATATAATGAAGATAATTTTCTTACTGGAATAGAAGCAACTATACATGAAACAGGTCA TGCATTGTACGAGCAAGATTTCATACCTAAGTATAGGCACCAGTTTGTAGGTCAAAAAAGAAATATGTCGTTACATGAAA GTCAATCATTACTTATGGAAATGCAAGTTGGAAGATCTCAAGAATTTGTTGAGTTTTTTGCTATGATACTTAGAGATGAA TTTGGTTTTAAAGGTCAAGAATACTCAAGTGATAATTTATATAAAATACTAAACAGAGTTAATCCAAGTTTGATAAGAGT TTATGCTGATGAAGTAACATATCCCATGCATGTAATTTTAAGATTTGAGCTTGAAGAAGGATTAATTAATGGCGATATTA CATTAGATGAACTTCCGGCTTGTTGGAATGATGGTATGAAAAAATATCTAGGTATTAGCCCTACTTCAAATAGTGTAGGC TGTATGCAAGATATACACTGGTCGGCTGGAAAATTCGGATATTTTCCTACCTATACTATTGGTGCTATTATAGCAAGCAT GATTATGAGAACAATCAAGAACATTTATCCAAATATCAATTCTGATTTTGCTGTAGGTAGGTTTGATAATTTACATAAGT TCTTAAATCAAAATATTAGGTGCTTTGCTTCGTTATATAAAACTGATGAATTAGTTAAACATGTAACTTTGGAAGATAAA GTCAATTCTCAAATATTTTCTGAATATATTGAAAATAAATATTTGAACTAA
Upstream 100 bases:
>100_bases TACTTGCTTCATTATACTAACGCAAGATATTTGACTATATGTATTAAATACTGTTTAATATAATAAGGTTTATATAAATT TGTATTGGGAAAACATAGAG
Downstream 100 bases:
>100_bases AAACAGAAGAAGAGGTAAAAAATATATTCTACTATAAAAATGTACATAAGCATAGGAATATAACTTGGTTTAATTTAGCA ATGGATATACATACAGATAA
Product: thermostable carboxypeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MKNYLLLEEEIKQVTRINNIITLLYWDLSTCMPVNAGTSRGEDIASLTTIVYDILRSDKIFDLIARAKEEIPQLDQWQTA NLALIEKKAIESRCIDYSLQKKYILAATQGELVWRQAKKENNYELFKPYLQQILNCVKEIASIKSKMLNCTMYDSLIDIY DYGRKATEIKEIFSAIKKTIPNLIHKIVEKQRKEVILPITNKVSIAKQEQICKRIMQILGFDFTKGRLDQSAHPFCRGMF DDIRLTTRYNEDNFLTGIEATIHETGHALYEQDFIPKYRHQFVGQKRNMSLHESQSLLMEMQVGRSQEFVEFFAMILRDE FGFKGQEYSSDNLYKILNRVNPSLIRVYADEVTYPMHVILRFELEEGLINGDITLDELPACWNDGMKKYLGISPTSNSVG CMQDIHWSAGKFGYFPTYTIGAIIASMIMRTIKNIYPNINSDFAVGRFDNLHKFLNQNIRCFASLYKTDELVKHVTLEDK VNSQIFSEYIENKYLN
Sequences:
>Translated_496_residues MKNYLLLEEEIKQVTRINNIITLLYWDLSTCMPVNAGTSRGEDIASLTTIVYDILRSDKIFDLIARAKEEIPQLDQWQTA NLALIEKKAIESRCIDYSLQKKYILAATQGELVWRQAKKENNYELFKPYLQQILNCVKEIASIKSKMLNCTMYDSLIDIY DYGRKATEIKEIFSAIKKTIPNLIHKIVEKQRKEVILPITNKVSIAKQEQICKRIMQILGFDFTKGRLDQSAHPFCRGMF DDIRLTTRYNEDNFLTGIEATIHETGHALYEQDFIPKYRHQFVGQKRNMSLHESQSLLMEMQVGRSQEFVEFFAMILRDE FGFKGQEYSSDNLYKILNRVNPSLIRVYADEVTYPMHVILRFELEEGLINGDITLDELPACWNDGMKKYLGISPTSNSVG CMQDIHWSAGKFGYFPTYTIGAIIASMIMRTIKNIYPNINSDFAVGRFDNLHKFLNQNIRCFASLYKTDELVKHVTLEDK VNSQIFSEYIENKYLN >Mature_496_residues MKNYLLLEEEIKQVTRINNIITLLYWDLSTCMPVNAGTSRGEDIASLTTIVYDILRSDKIFDLIARAKEEIPQLDQWQTA NLALIEKKAIESRCIDYSLQKKYILAATQGELVWRQAKKENNYELFKPYLQQILNCVKEIASIKSKMLNCTMYDSLIDIY DYGRKATEIKEIFSAIKKTIPNLIHKIVEKQRKEVILPITNKVSIAKQEQICKRIMQILGFDFTKGRLDQSAHPFCRGMF DDIRLTTRYNEDNFLTGIEATIHETGHALYEQDFIPKYRHQFVGQKRNMSLHESQSLLMEMQVGRSQEFVEFFAMILRDE FGFKGQEYSSDNLYKILNRVNPSLIRVYADEVTYPMHVILRFELEEGLINGDITLDELPACWNDGMKKYLGISPTSNSVG CMQDIHWSAGKFGYFPTYTIGAIIASMIMRTIKNIYPNINSDFAVGRFDNLHKFLNQNIRCFASLYKTDELVKHVTLEDK VNSQIFSEYIENKYLN
Specific function: Unknown
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: NA
Molecular weight: Translated: 57668; Mature: 57668
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNYLLLEEEIKQVTRINNIITLLYWDLSTCMPVNAGTSRGEDIASLTTIVYDILRSDKI CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH FDLIARAKEEIPQLDQWQTANLALIEKKAIESRCIDYSLQKKYILAATQGELVWRQAKKE HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCC NNYELFKPYLQQILNCVKEIASIKSKMLNCTMYDSLIDIYDYGRKATEIKEIFSAIKKTI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH PNLIHKIVEKQRKEVILPITNKVSIAKQEQICKRIMQILGFDFTKGRLDQSAHPFCRGMF HHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCH DDIRLTTRYNEDNFLTGIEATIHETGHALYEQDFIPKYRHQFVGQKRNMSLHESQSLLME HHEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHH MQVGRSQEFVEFFAMILRDEFGFKGQEYSSDNLYKILNRVNPSLIRVYADEVTYPMHVIL HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHEEHHHHHCCCCCHHEE RFELEEGLINGDITLDELPACWNDGMKKYLGISPTSNSVGCMQDIHWSAGKFGYFPTYTI EEEHHCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHH GAIIASMIMRTIKNIYPNINSDFAVGRFDNLHKFLNQNIRCFASLYKTDELVKHVTLEDK HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VNSQIFSEYIENKYLN HHHHHHHHHHHHCCCC >Mature Secondary Structure MKNYLLLEEEIKQVTRINNIITLLYWDLSTCMPVNAGTSRGEDIASLTTIVYDILRSDKI CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH FDLIARAKEEIPQLDQWQTANLALIEKKAIESRCIDYSLQKKYILAATQGELVWRQAKKE HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCC NNYELFKPYLQQILNCVKEIASIKSKMLNCTMYDSLIDIYDYGRKATEIKEIFSAIKKTI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH PNLIHKIVEKQRKEVILPITNKVSIAKQEQICKRIMQILGFDFTKGRLDQSAHPFCRGMF HHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCH DDIRLTTRYNEDNFLTGIEATIHETGHALYEQDFIPKYRHQFVGQKRNMSLHESQSLLME HHEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHH MQVGRSQEFVEFFAMILRDEFGFKGQEYSSDNLYKILNRVNPSLIRVYADEVTYPMHVIL HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHEEHHHHHCCCCCHHEE RFELEEGLINGDITLDELPACWNDGMKKYLGISPTSNSVGCMQDIHWSAGKFGYFPTYTI EEEHHCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHH GAIIASMIMRTIKNIYPNINSDFAVGRFDNLHKFLNQNIRCFASLYKTDELVKHVTLEDK HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VNSQIFSEYIENKYLN HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]