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The map label for this gene is traH [H]

Identifier: 189183106

GI number: 189183106

Start: 193211

End: 194104

Strand: Direct

Name: traH [H]

Synonym: OTT_0199

Alternate gene names: 189183106

Gene position: 193211-194104 (Clockwise)

Preceding gene: 189183105

Following gene: 189183107

Centisome position: 9.62

GC content: 36.8

Gene sequence:

>894_bases
ATGAGCATTAGAATCAGAGTTTATGCCATTACAATGCTATTATTACTACAAGCTCCAGTATCACTAGCTTGGAATATCGA
AAACGTATTTCAAAGAATGAGTGTTAATGTTACTAGATCTGGATCATACCAAGATCAGGCGGCTGGATATTATGCGGCTG
GCGGATTATCTGCCAGAACAAGCCAAACATCATTTCAGCCATTTGCTATAACTTCACCATCTTTAAACATGAGCTGTAGC
GGTATTGACGCCTATCTTGGTAGCTTCTCTGTTATTTCTGGAGAAGAATTAGTTCAACTAATGAAAAACATTGGTTCTCA
AGCTAAAGTTTATGCATTTTCATTAGGATTAAAAACATTTGCTCCACAGATCGAAAATGCTCTTAAGGACTTGCGTAATC
TAGCAATGGAGATGAATCAATTTGCCAAAGGAGATTGTGAATTAACAAAAGCATTATTTGCTACAGCTTTACCAAAGAAC
TGGGCTATGAGAGAAGCTGTTTGCCGTGATATACAGTCACAAAGTGGATTTGATTATTTTGCAGCTGGTAAAAAATGTCG
TAATTATTTAGATCAAAAACAAGCTCTGCGACAAGCACAAAATAAGGATTCAGAGTTAATGCTTGATGATTATAACATCT
TCACTAAAGCAGCAGCAAAGGTTGGAATACCATCAGATATGCGTGATTCAATCATGTCTATGACTGGTACTATCGTCGTT
ACAAACAATAATGTACACTTTTATGACTCCTTAGCTCAGGACGAAAAAAGTTGGATTAGTCATTTAAAAGGCGGAGAATC
AGCCTCGATTTACAGCTGTGATAGTGTTAGTTGCTTGCATTCAACGCTTGCAACGAAATATCACAATATTACCAGAGAAA
TCTTATGCAGGTAA

Upstream 100 bases:

>100_bases
GTAAAAAAATATATGCAGTAGCTAGAGGCATAATCTCTGAGAATAAAATTATCGACAATATTCTAGCAATCGATAGATAT
TATCATAAATTGGAGACTAG

Downstream 100 bases:

>100_bases
AGCTAAACAACAATTTAAGAATCTAAAAATTAAATTTAATAATAATACTGAATTTAGTAACCATGAAATAGCCTTTTTAT
CTTCGATTGGAGATATATTT

Product: putative conjugative transfer protein TraH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSIRIRVYAITMLLLLQAPVSLAWNIENVFQRMSVNVTRSGSYQDQAAGYYAAGGLSARTSQTSFQPFAITSPSLNMSCS
GIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPKN
WAMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSDMRDSIMSMTGTIVV
TNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHSTLATKYHNITREILCR

Sequences:

>Translated_297_residues
MSIRIRVYAITMLLLLQAPVSLAWNIENVFQRMSVNVTRSGSYQDQAAGYYAAGGLSARTSQTSFQPFAITSPSLNMSCS
GIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPKN
WAMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSDMRDSIMSMTGTIVV
TNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHSTLATKYHNITREILCR
>Mature_296_residues
SIRIRVYAITMLLLLQAPVSLAWNIENVFQRMSVNVTRSGSYQDQAAGYYAAGGLSARTSQTSFQPFAITSPSLNMSCSG
IDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPKNW
AMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSDMRDSIMSMTGTIVVT
NNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHSTLATKYHNITREILCR

Specific function: Involved in pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010927 [H]

Pfam domain/function: PF06122 TraH [H]

EC number: NA

Molecular weight: Translated: 32860; Mature: 32729

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRIRVYAITMLLLLQAPVSLAWNIENVFQRMSVNVTRSGSYQDQAAGYYAAGGLSART
CCEEEEHHHHHHHHHHHCCHHHEECHHHHHHHHHCCEECCCCCCHHCCCEEECCCCCCCC
SQTSFQPFAITSPSLNMSCSGIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTF
CCCCCCCEEEECCCCCCCCCHHHHHHCCCCEECHHHHHHHHHHCCCCCEEEEEEHHHHHH
APQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPKNWAMREAVCRDIQSQSGFDYF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHH
AAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSDMRDSIMSMTGTIVV
HCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHCCEEEE
TNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHSTLATKYHNITREILCR
ECCCEEEHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIRIRVYAITMLLLLQAPVSLAWNIENVFQRMSVNVTRSGSYQDQAAGYYAAGGLSART
CEEEEHHHHHHHHHHHCCHHHEECHHHHHHHHHCCEECCCCCCHHCCCEEECCCCCCCC
SQTSFQPFAITSPSLNMSCSGIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTF
CCCCCCCEEEECCCCCCCCCHHHHHHCCCCEECHHHHHHHHHHCCCCCEEEEEEHHHHHH
APQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPKNWAMREAVCRDIQSQSGFDYF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHH
AAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSDMRDSIMSMTGTIVV
HCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHCCEEEE
TNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHSTLATKYHNITREILCR
ECCCEEEHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1348105; 7915817; 2656408 [H]