| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183104
Identifier: 189183104
GI number: 189183104
Start: 192854
End: 193039
Strand: Direct
Name: 189183104
Synonym: OTT_0197
Alternate gene names: NA
Gene position: 192854-193039 (Clockwise)
Preceding gene: 189183103
Following gene: 189183105
Centisome position: 9.6
GC content: 32.8
Gene sequence:
>186_bases ATGCTACACTCATCATTGCGTAATAACTCAATCTTTTGTTTAGGAGGTAATTGCAACACTCCAACTATTATACCAAATAG AGATATAGCTAAAGTAGCTCATCTAGCAATGCTAAATCAGATGAGCAAAGACATTAAAACAAATCCTGTTTCTGTATTTT CAGGAAAACATCGCAAATGCAAATAA
Upstream 100 bases:
>100_bases TCAAAATTGCGAGTTAAAAAACAGCACTTGCCAAAAATCAGTAGCAAATATTTGTTTACTCTAGCAGCACGATTATAGCT GTTCAACTGAGAAGCAAACA
Downstream 100 bases:
>100_bases GAATAATGAGTTGCTTAATAAACTAAATCCTAAGCATGTTGTGCCTGTATTATATCTAGTAGCTAGCGATGGTAAAAAAA TATATGCAGTAGCTAGAGGC
Product: putative conjugative transfer protein TraN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCK
Sequences:
>Translated_61_residues MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCK >Mature_61_residues MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6752; Mature: 6752
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKC CCCCCCCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC K C >Mature Secondary Structure MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKC CCCCCCCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA