Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183104

Identifier: 189183104

GI number: 189183104

Start: 192854

End: 193039

Strand: Direct

Name: 189183104

Synonym: OTT_0197

Alternate gene names: NA

Gene position: 192854-193039 (Clockwise)

Preceding gene: 189183103

Following gene: 189183105

Centisome position: 9.6

GC content: 32.8

Gene sequence:

>186_bases
ATGCTACACTCATCATTGCGTAATAACTCAATCTTTTGTTTAGGAGGTAATTGCAACACTCCAACTATTATACCAAATAG
AGATATAGCTAAAGTAGCTCATCTAGCAATGCTAAATCAGATGAGCAAAGACATTAAAACAAATCCTGTTTCTGTATTTT
CAGGAAAACATCGCAAATGCAAATAA

Upstream 100 bases:

>100_bases
TCAAAATTGCGAGTTAAAAAACAGCACTTGCCAAAAATCAGTAGCAAATATTTGTTTACTCTAGCAGCACGATTATAGCT
GTTCAACTGAGAAGCAAACA

Downstream 100 bases:

>100_bases
GAATAATGAGTTGCTTAATAAACTAAATCCTAAGCATGTTGTGCCTGTATTATATCTAGTAGCTAGCGATGGTAAAAAAA
TATATGCAGTAGCTAGAGGC

Product: putative conjugative transfer protein TraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 61

Protein sequence:

>61_residues
MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCK

Sequences:

>Translated_61_residues
MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCK
>Mature_61_residues
MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6752; Mature: 6752

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKC
CCCCCCCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC
K
C
>Mature Secondary Structure
MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKC
CCCCCCCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA