| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183068
Identifier: 189183068
GI number: 189183068
Start: 150404
End: 151798
Strand: Direct
Name: 189183068
Synonym: OTT_0161
Alternate gene names: NA
Gene position: 150404-151798 (Clockwise)
Preceding gene: 189183067
Following gene: 189183069
Centisome position: 7.49
GC content: 25.66
Gene sequence:
>1395_bases ATGCTTGTTATAAGCACTTTAATAGATGAATTAAAGGACATAGAAAAATATACTGATATACTTGATGATAATATTCTAAC TACAGATCAGTATATTCAACAGATCATTGATATACTTAATATTAATAAAATAAAATTGGATAGTGAGTATAATACTAGTA GTAAGCTACTTAATAATTTAATTACTAATGTTGGTATTGATGAGCAAAATAAAACATTTGAGTTAAGTGATAAAGAAATT AATGATTTAATTGATGAAATAGTTGGGAGTAATAATGGTAATTATTTGGTAATAAAAATTATAGATTATGTAACTGATCT AATAAATATTAGAAATGAAGTAATAAAGTTTGTCAAAAAATATAAAATAGCTGAAGCACAGCATTTGATTACATTTCAAA CAAAAAATGATAATTTAAGTGATTTTATACGTAAGATGCAAGTTATTCATATAGGACTTAAGTATGCAATTGAAAATCAA GATCCTGAATTGTTTAAGTTTTTCATTCAAAATAGTCATGAACATATTAAGTATATTACTTATTTCAATAATCATCATAA TGATATAATAAGATTAGAAAATATAATTGTTTGCTGGACATTACAGCATATAGTGGAAGCTAAAAATACATATAGTTTAA TTAATGTATATGCAGCCAAAATGCTTGATGATATGTTCAGTGTTTTTTCATCTCTTAACTTTGATTTTGATCCATGTATT ACACGTTGTAAGTTAAGATTTGACACTGATAAGACATTGGTAAATGCACTAAATATCGTTATTAATAGTAACAAGGTAGT CCCAACATTAGAATTGTTAAAAATTTATAATGGAGATAATACTAAGCTTAAAGTCTTTAATAATAACATTATCTCTACTG AGATAATGTTATTATTAAAAATAAATGATTTTGTTCATTATCAGTGTTGTAACAGTAGCATCTTGCAAGAAATGTTTTCA TTCGAGAGTTCTATCAACCTTTTGCAGCATAAGCTTCCACATAAAGAATTTTATGAACTTAAGGCTGCAGCAGACTCTGT TAGAGTAAGTAAACAAATTCATTCGCAGGAGTTACAAACTATAAAACTAGGTAATATTTGTGATGATGATAGTAGTATCA ATAATGAAAGTTATGACTATGTAAAATTACTTAAAAAGCTTCTCTTTAGAAGTAATTCTTATAAGTTACAAAAGTGTGAG CGTAGTAATCATCAAGAAGTTATAGTTAGACAAAGTGGATATGTACCCACGCATGAGAAGAAGGACAATTATTATTCTGA GAAACAACTACTACATGAAATTACTTTAGAACATCATTATGATGACAATACCACATTTGATGTTGATTCAATTTCAATAG GAAATGATATACAATATACTACAATAACACTTTAA
Upstream 100 bases:
>100_bases ACTCCTAACATAATATACAAAACCAACTCAAAGTTGCTTTTTTGGAGATTTAAGTTTATAATTAAGTTAATTTTTTTTAG TGAATAGGAAGGTTAAATAT
Downstream 100 bases:
>100_bases TAAAGCTAGAGTTCAATAAGCTGCTAGGTAAGTATGAGAGCACTTTTCCTCAAAAAGAACAGTACATGATAGTCACGTCA TACAGCTCAAGCCTCTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MLVISTLIDELKDIEKYTDILDDNILTTDQYIQQIIDILNINKIKLDSEYNTSSKLLNNLITNVGIDEQNKTFELSDKEI NDLIDEIVGSNNGNYLVIKIIDYVTDLINIRNEVIKFVKKYKIAEAQHLITFQTKNDNLSDFIRKMQVIHIGLKYAIENQ DPELFKFFIQNSHEHIKYITYFNNHHNDIIRLENIIVCWTLQHIVEAKNTYSLINVYAAKMLDDMFSVFSSLNFDFDPCI TRCKLRFDTDKTLVNALNIVINSNKVVPTLELLKIYNGDNTKLKVFNNNIISTEIMLLLKINDFVHYQCCNSSILQEMFS FESSINLLQHKLPHKEFYELKAAADSVRVSKQIHSQELQTIKLGNICDDDSSINNESYDYVKLLKKLLFRSNSYKLQKCE RSNHQEVIVRQSGYVPTHEKKDNYYSEKQLLHEITLEHHYDDNTTFDVDSISIGNDIQYTTITL
Sequences:
>Translated_464_residues MLVISTLIDELKDIEKYTDILDDNILTTDQYIQQIIDILNINKIKLDSEYNTSSKLLNNLITNVGIDEQNKTFELSDKEI NDLIDEIVGSNNGNYLVIKIIDYVTDLINIRNEVIKFVKKYKIAEAQHLITFQTKNDNLSDFIRKMQVIHIGLKYAIENQ DPELFKFFIQNSHEHIKYITYFNNHHNDIIRLENIIVCWTLQHIVEAKNTYSLINVYAAKMLDDMFSVFSSLNFDFDPCI TRCKLRFDTDKTLVNALNIVINSNKVVPTLELLKIYNGDNTKLKVFNNNIISTEIMLLLKINDFVHYQCCNSSILQEMFS FESSINLLQHKLPHKEFYELKAAADSVRVSKQIHSQELQTIKLGNICDDDSSINNESYDYVKLLKKLLFRSNSYKLQKCE RSNHQEVIVRQSGYVPTHEKKDNYYSEKQLLHEITLEHHYDDNTTFDVDSISIGNDIQYTTITL >Mature_464_residues MLVISTLIDELKDIEKYTDILDDNILTTDQYIQQIIDILNINKIKLDSEYNTSSKLLNNLITNVGIDEQNKTFELSDKEI NDLIDEIVGSNNGNYLVIKIIDYVTDLINIRNEVIKFVKKYKIAEAQHLITFQTKNDNLSDFIRKMQVIHIGLKYAIENQ DPELFKFFIQNSHEHIKYITYFNNHHNDIIRLENIIVCWTLQHIVEAKNTYSLINVYAAKMLDDMFSVFSSLNFDFDPCI TRCKLRFDTDKTLVNALNIVINSNKVVPTLELLKIYNGDNTKLKVFNNNIISTEIMLLLKINDFVHYQCCNSSILQEMFS FESSINLLQHKLPHKEFYELKAAADSVRVSKQIHSQELQTIKLGNICDDDSSINNESYDYVKLLKKLLFRSNSYKLQKCE RSNHQEVIVRQSGYVPTHEKKDNYYSEKQLLHEITLEHHYDDNTTFDVDSISIGNDIQYTTITL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54187; Mature: 54187
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVISTLIDELKDIEKYTDILDDNILTTDQYIQQIIDILNINKIKLDSEYNTSSKLLNNL CEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHH ITNVGIDEQNKTFELSDKEINDLIDEIVGSNNGNYLVIKIIDYVTDLINIRNEVIKFVKK HHHCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH YKIAEAQHLITFQTKNDNLSDFIRKMQVIHIGLKYAIENQDPELFKFFIQNSHEHIKYIT HHHHCCCEEEEEEECCCCHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCEEEEE YFNNHHNDIIRLENIIVCWTLQHIVEAKNTYSLINVYAAKMLDDMFSVFSSLNFDFDPCI EEECCCCCEEEECCEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH TRCKLRFDTDKTLVNALNIVINSNKVVPTLELLKIYNGDNTKLKVFNNNIISTEIMLLLK HHEEEEECCHHHHHHHHHHEECCCCCCCHHHHHEEECCCCCEEEEECCCEEHHHEEEEEE INDFVHYQCCNSSILQEMFSFESSINLLQHKLPHKEFYELKAAADSVRVSKQIHSQELQT ECCHHEEHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCE IKLGNICDDDSSINNESYDYVKLLKKLLFRSNSYKLQKCERSNHQEVIVRQSGYVPTHEK EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEECCCCCCCCCC KDNYYSEKQLLHEITLEHHYDDNTTFDVDSISIGNDIQYTTITL CCCHHHHHHHHHHHHHHHCCCCCCEEEECCEECCCCCEEEEEEC >Mature Secondary Structure MLVISTLIDELKDIEKYTDILDDNILTTDQYIQQIIDILNINKIKLDSEYNTSSKLLNNL CEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHH ITNVGIDEQNKTFELSDKEINDLIDEIVGSNNGNYLVIKIIDYVTDLINIRNEVIKFVKK HHHCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH YKIAEAQHLITFQTKNDNLSDFIRKMQVIHIGLKYAIENQDPELFKFFIQNSHEHIKYIT HHHHCCCEEEEEEECCCCHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCEEEEE YFNNHHNDIIRLENIIVCWTLQHIVEAKNTYSLINVYAAKMLDDMFSVFSSLNFDFDPCI EEECCCCCEEEECCEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH TRCKLRFDTDKTLVNALNIVINSNKVVPTLELLKIYNGDNTKLKVFNNNIISTEIMLLLK HHEEEEECCHHHHHHHHHHEECCCCCCCHHHHHEEECCCCCEEEEECCCEEHHHEEEEEE INDFVHYQCCNSSILQEMFSFESSINLLQHKLPHKEFYELKAAADSVRVSKQIHSQELQT ECCHHEEHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCE IKLGNICDDDSSINNESYDYVKLLKKLLFRSNSYKLQKCERSNHQEVIVRQSGYVPTHEK EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEECCCCCCCCCC KDNYYSEKQLLHEITLEHHYDDNTTFDVDSISIGNDIQYTTITL CCCHHHHHHHHHHHHHHHCCCCCCEEEECCEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA