| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183054
Identifier: 189183054
GI number: 189183054
Start: 140149
End: 140514
Strand: Reverse
Name: 189183054
Synonym: OTT_0147
Alternate gene names: NA
Gene position: 140514-140149 (Counterclockwise)
Preceding gene: 189183057
Following gene: 189183051
Centisome position: 6.99
GC content: 28.14
Gene sequence:
>366_bases ATGGCAAGAAGATACAGTTATGATTTAAGAATGAAGATATTCAAAGCACTAGATGAGGGAGTATCAATTGTTAAAGCATG TAAAATATTCAATATAAGTCGTAATACGATATATAGATGGAAACATCTTAAAAGGGAAACAGGAGATATTAAAGCAAAAC CTTATGGCCCAGCCAAAGGTTATAATGCGAAAATAGATCTCAAAGAATTTGAGGAGTTAATTATCAATCATCATGATAAA ACAGCTAAAGAATTAAGTATTATACTAGGTAATAGATTACAAAGAACTAGAATAAATTATTATAGAAAACTACTAGGATA CACTTATAAAAAACTCATTTTCATTCCAAAAGGGATATTGTGTTAA
Upstream 100 bases:
>100_bases TTGTCAGTTTCTCAACGAACTTCTATAGGTATAGCATGAACGTAGGAAATAGGTACATAATATGCTAATATGAAAAGAGT ATAAAAAAAATAGATAAATA
Downstream 100 bases:
>100_bases GGAATGAATTTATCGAGAAGGTAAAGCAAATTTCTAAAGAAAATCTAGTATTTATTGATGAGTCAGGAATATAGGATAAT GCTTGTAGAGAATATGGATG
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MARRYSYDLRMKIFKALDEGVSIVKACKIFNISRNTIYRWKHLKRETGDIKAKPYGPAKGYNAKIDLKEFEELIINHHDK TAKELSIILGNRLQRTRINYYRKLLGYTYKKLIFIPKGILC
Sequences:
>Translated_121_residues MARRYSYDLRMKIFKALDEGVSIVKACKIFNISRNTIYRWKHLKRETGDIKAKPYGPAKGYNAKIDLKEFEELIINHHDK TAKELSIILGNRLQRTRINYYRKLLGYTYKKLIFIPKGILC >Mature_120_residues ARRYSYDLRMKIFKALDEGVSIVKACKIFNISRNTIYRWKHLKRETGDIKAKPYGPAKGYNAKIDLKEFEELIINHHDKT AKELSIILGNRLQRTRINYYRKLLGYTYKKLIFIPKGILC
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14341; Mature: 14210
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRYSYDLRMKIFKALDEGVSIVKACKIFNISRNTIYRWKHLKRETGDIKAKPYGPAKG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC YNAKIDLKEFEELIINHHDKTAKELSIILGNRLQRTRINYYRKLLGYTYKKLIFIPKGIL CCCEECHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC C C >Mature Secondary Structure ARRYSYDLRMKIFKALDEGVSIVKACKIFNISRNTIYRWKHLKRETGDIKAKPYGPAKG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC YNAKIDLKEFEELIINHHDKTAKELSIILGNRLQRTRINYYRKLLGYTYKKLIFIPKGIL CCCEECHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC C C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA