| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183015
Identifier: 189183015
GI number: 189183015
Start: 104424
End: 104681
Strand: Direct
Name: 189183015
Synonym: OTT_0108
Alternate gene names: NA
Gene position: 104424-104681 (Clockwise)
Preceding gene: 189183014
Following gene: 189183016
Centisome position: 5.2
GC content: 25.97
Gene sequence:
>258_bases ATGATCCAAATTGCTCAGATGCTTATTATAACTAAGTACAAACCTAATTTTGCTGAAAATTATCTAGAAAAAGGAATTTC ATTAGTAAGCTTAGAACAATATTCAAATGCTAAAGACAATTTTCTATTAGCTACTAAATATAATCCTAATATCATAGTAG GATATGAAACAGCGCTTAAAAGGTTAATAGAATTAGAAAAATTTACTGTTGCAAAAGAATTTGAGCAAAAACTACAGATA TTGAAAAAATACTCTTGA
Upstream 100 bases:
>100_bases ATTGAAAACTATGATACAGCTCTATTAGATATAGATCAAAGTATTAAGTTTACTAAAAAAATATCATGAGCAGTAGAAAG ATGTAACTTAGCTATTAAAT
Downstream 100 bases:
>100_bases GATAGATGAATTTTCAGAATCAAGGAAATTTCACCATGGGATCACAGTTATTTGCCCATAAGTTAAGAATGTTTGGGCAA GGTAGTACCAATGTTTTTAC
Product: TPR repeat-containing protein 01_02
Products: NA
Alternate protein names: TPR Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MIQIAQMLIITKYKPNFAENYLEKGISLVSLEQYSNAKDNFLLATKYNPNIIVGYETALKRLIELEKFTVAKEFEQKLQI LKKYS
Sequences:
>Translated_85_residues MIQIAQMLIITKYKPNFAENYLEKGISLVSLEQYSNAKDNFLLATKYNPNIIVGYETALKRLIELEKFTVAKEFEQKLQI LKKYS >Mature_85_residues MIQIAQMLIITKYKPNFAENYLEKGISLVSLEQYSNAKDNFLLATKYNPNIIVGYETALKRLIELEKFTVAKEFEQKLQI LKKYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9936; Mature: 9936
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQIAQMLIITKYKPNFAENYLEKGISLVSLEQYSNAKDNFLLATKYNPNIIVGYETALK CCHHHHHHHHHCCCCCHHHHHHHCCCCEEEHHHHCCCCCCEEEEEECCCCEEEEHHHHHH RLIELEKFTVAKEFEQKLQILKKYS HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIQIAQMLIITKYKPNFAENYLEKGISLVSLEQYSNAKDNFLLATKYNPNIIVGYETALK CCHHHHHHHHHCCCCCHHHHHHHCCCCEEEHHHHCCCCCCEEEEEECCCCEEEEHHHHHH RLIELEKFTVAKEFEQKLQILKKYS HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA