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The map label for this gene is traU [H]

Identifier: 189183011

GI number: 189183011

Start: 100876

End: 101853

Strand: Direct

Name: traU [H]

Synonym: OTT_0104

Alternate gene names: 189183011

Gene position: 100876-101853 (Clockwise)

Preceding gene: 189183010

Following gene: 189183012

Centisome position: 5.02

GC content: 38.55

Gene sequence:

>978_bases
GTGAAGGAACTGGTAATTTTGTTTGCGATAGTAATGTCTATAACAGCTAATAACTGTTATGCAGCTGCTGGATGTGTTGG
ACGATTTGTAAATCCCATAACAGATGTATGTTGGAAATGCTTGTTTCCAATTACTATAGCTGGATTTAAGGTAGTTAGTA
GTTCAATGCCTGATACTAATGCTTCTGGTAGACTTATATGTCTTTGTCCAAAGCCAGGAATTCCAGTGCCTGTACCTGGT
ATTCCTGTTGGATTTTGGGAGCCAGTACGCCTTGTAGATGTTACAAAATCACCAATGTGTATGGTAAGTCTTGGGGGTTT
GTCATTTGGAAGTGCTACTCAAAAAGGCATGAAAGATGAGGCTGAAGGAAATGCTTTTTATCACATTCATTGGTATGTCT
ACCCAGTGATTTATTGGTTAGAGATTTTGCTTGATTTTATTTGTCTGGAAATGGCTGCAGTAGATATAGCATATTTAACA
GAGTTTGATCCATTATGGAGCGATGATGCTAAATCTGCGATTTTAAATCCAGAAACGCTGTTGTTTCAAAATGTAGCTGC
TTATCAAGCATGTATAGCTGATTGCATGGGTTGTAGCGCTGGTTTATTAGCAAGTGATTATGCTTTTTGGTGTGCTGAAT
GTCAAGGAATGCTTTACCCTTTTACTGGAACAGCAGCAGCGCATAATGGTGGAGTTGGAACATCTGTATTAATGGTAAGT
AAGTTTATGGCTAAGATGCATAGGCAGCTGATGTTATGGGGATATTATGGTTATAAAGGCCTATGTGGTAAGTATCCAAT
GCCTATCATCAAGAAAAGTCAGTATCGACTACAAATGACTTATCCAATTCCAGAAACCAAATCCTGTAAGAGCATAGGTC
AAACAGAAGCTACATGGCAAGCTGGCAGAGAATTTCCAGTTAATGGTGAAGATTTTGGTTACTTGATTTGGCGAAAAAGA
GATTGCTGTTTGCAATGA

Upstream 100 bases:

>100_bases
TTTATATTTAGTGCCAGGTGTCAAAGATATAGAAAATACTGCTAGCAAATTTCGAAAATATAAAAAAAAGGAAGTATACA
TAATCAAGAAAAGCTGGTAA

Downstream 100 bases:

>100_bases
AAAAATATACAAGTTAGCATGTGATAGCAAAATGGCCGTAAGACGAATGAGAAATGCTGTTGCTGATAGGCTTGGCGTAT
CTTGTATGATAAAAATAAGT

Product: putative conjugative transfer protein TraU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKELVILFAIVMSITANNCYAAAGCVGRFVNPITDVCWKCLFPITIAGFKVVSSSMPDTNASGRLICLCPKPGIPVPVPG
IPVGFWEPVRLVDVTKSPMCMVSLGGLSFGSATQKGMKDEAEGNAFYHIHWYVYPVIYWLEILLDFICLEMAAVDIAYLT
EFDPLWSDDAKSAILNPETLLFQNVAAYQACIADCMGCSAGLLASDYAFWCAECQGMLYPFTGTAAAHNGGVGTSVLMVS
KFMAKMHRQLMLWGYYGYKGLCGKYPMPIIKKSQYRLQMTYPIPETKSCKSIGQTEATWQAGREFPVNGEDFGYLIWRKR
DCCLQ

Sequences:

>Translated_325_residues
MKELVILFAIVMSITANNCYAAAGCVGRFVNPITDVCWKCLFPITIAGFKVVSSSMPDTNASGRLICLCPKPGIPVPVPG
IPVGFWEPVRLVDVTKSPMCMVSLGGLSFGSATQKGMKDEAEGNAFYHIHWYVYPVIYWLEILLDFICLEMAAVDIAYLT
EFDPLWSDDAKSAILNPETLLFQNVAAYQACIADCMGCSAGLLASDYAFWCAECQGMLYPFTGTAAAHNGGVGTSVLMVS
KFMAKMHRQLMLWGYYGYKGLCGKYPMPIIKKSQYRLQMTYPIPETKSCKSIGQTEATWQAGREFPVNGEDFGYLIWRKR
DCCLQ
>Mature_325_residues
MKELVILFAIVMSITANNCYAAAGCVGRFVNPITDVCWKCLFPITIAGFKVVSSSMPDTNASGRLICLCPKPGIPVPVPG
IPVGFWEPVRLVDVTKSPMCMVSLGGLSFGSATQKGMKDEAEGNAFYHIHWYVYPVIYWLEILLDFICLEMAAVDIAYLT
EFDPLWSDDAKSAILNPETLLFQNVAAYQACIADCMGCSAGLLASDYAFWCAECQGMLYPFTGTAAAHNGGVGTSVLMVS
KFMAKMHRQLMLWGYYGYKGLCGKYPMPIIKKSQYRLQMTYPIPETKSCKSIGQTEATWQAGREFPVNGEDFGYLIWRKR
DCCLQ

Specific function: Appears to be more essential to conjugal DNA transfer than to assembly of pilus filaments. Required for F plasmid conjugative transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009649 [H]

Pfam domain/function: PF06834 TraU [H]

EC number: NA

Molecular weight: Translated: 35934; Mature: 35934

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELVILFAIVMSITANNCYAAAGCVGRFVNPITDVCWKCLFPITIAGFKVVSSSMPDTN
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ASGRLICLCPKPGIPVPVPGIPVGFWEPVRLVDVTKSPMCMVSLGGLSFGSATQKGMKDE
CCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHCCCCC
AEGNAFYHIHWYVYPVIYWLEILLDFICLEMAAVDIAYLTEFDPLWSDDAKSAILNPETL
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHH
LFQNVAAYQACIADCMGCSAGLLASDYAFWCAECQGMLYPFTGTAAAHNGGVGTSVLMVS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHH
KFMAKMHRQLMLWGYYGYKGLCGKYPMPIIKKSQYRLQMTYPIPETKSCKSIGQTEATWQ
HHHHHHHHHHEEEEECCCCCCCCCCCCCCEECCCEEEEEEECCCCCHHHHHCCCCHHHHH
AGREFPVNGEDFGYLIWRKRDCCLQ
CCCCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKELVILFAIVMSITANNCYAAAGCVGRFVNPITDVCWKCLFPITIAGFKVVSSSMPDTN
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ASGRLICLCPKPGIPVPVPGIPVGFWEPVRLVDVTKSPMCMVSLGGLSFGSATQKGMKDE
CCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHCCCCC
AEGNAFYHIHWYVYPVIYWLEILLDFICLEMAAVDIAYLTEFDPLWSDDAKSAILNPETL
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHH
LFQNVAAYQACIADCMGCSAGLLASDYAFWCAECQGMLYPFTGTAAAHNGGVGTSVLMVS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHH
KFMAKMHRQLMLWGYYGYKGLCGKYPMPIIKKSQYRLQMTYPIPETKSCKSIGQTEATWQ
HHHHHHHHHHEEEEECCCCCCCCCCCCCCEECCCEEEEEEECCCCCHHHHHCCCCHHHHH
AGREFPVNGEDFGYLIWRKRDCCLQ
CCCCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2198250; 7915817; 2050638; 1355084 [H]