| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183004
Identifier: 189183004
GI number: 189183004
Start: 96672
End: 96899
Strand: Direct
Name: 189183004
Synonym: OTT_0097
Alternate gene names: NA
Gene position: 96672-96899 (Clockwise)
Preceding gene: 189183003
Following gene: 189183005
Centisome position: 4.81
GC content: 40.35
Gene sequence:
>228_bases TTGATAGGTGAAGATGGACGTTCTGGAATTAAAGGAATCGTGGTAGATAAATCGTCTAACATAGCAAGCATGGCTGCATT AAATGGAATATTTAGCAATATTGCTAAGTTTCTGCAAGCTAAGGCTATTAAACCTGATATGCTACCAACTTTAAACCTAG TAGCTGGAGGCCAACAACAAGAGTTTCAGATTGGAGAGGTTTCAGTCTGGAGCTTACGCTGGAGCTAG
Upstream 100 bases:
>100_bases TTACTTTAAAGCTTGTTAAGCTCAGCATCAAGCATATTAAAACTGCTTCAAAGTAAAATTTCATTATGGAGATATTATTG AAAAGCAGGTGGAAGGCTGG
Downstream 100 bases:
>100_bases CAATGCTTTTGATAAGCTAGCTGATTTTGCTATAAAACGAGCTGATTCTATGAGCCCAGTCGTTCTTATTGCGTCAGGTA GAGTCATAGATGTTGTATTT
Product: putative conjugative transfer protein TraB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MIGEDGRSGIKGIVVDKSSNIASMAALNGIFSNIAKFLQAKAIKPDMLPTLNLVAGGQQQEFQIGEVSVWSLRWS
Sequences:
>Translated_75_residues MIGEDGRSGIKGIVVDKSSNIASMAALNGIFSNIAKFLQAKAIKPDMLPTLNLVAGGQQQEFQIGEVSVWSLRWS >Mature_75_residues MIGEDGRSGIKGIVVDKSSNIASMAALNGIFSNIAKFLQAKAIKPDMLPTLNLVAGGQQQEFQIGEVSVWSLRWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8034; Mature: 8034
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGEDGRSGIKGIVVDKSSNIASMAALNGIFSNIAKFLQAKAIKPDMLPTLNLVAGGQQQ CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHEEECCCCC EFQIGEVSVWSLRWS CEEECCEEEEEEECC >Mature Secondary Structure MIGEDGRSGIKGIVVDKSSNIASMAALNGIFSNIAKFLQAKAIKPDMLPTLNLVAGGQQQ CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHEEECCCCC EFQIGEVSVWSLRWS CEEECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA