| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is znuA
Identifier: 189182931
GI number: 189182931
Start: 30488
End: 31384
Strand: Direct
Name: znuA
Synonym: OTT_0024
Alternate gene names: NA
Gene position: 30488-31384 (Clockwise)
Preceding gene: 189182930
Following gene: 189182932
Centisome position: 1.52
GC content: 26.42
Gene sequence:
>897_bases ATGATTTTTTTTAAACTTAAGTTATTTAGGTTAAGTGTAATAGCTTTTTTAATATTTAATTATTGTAGTATTAATATTAT TTTTGCTAAAAAAAAGCTTCGAATTGTTACTTCTAATATTCCAACTGCAGCAATTGTAAAAGCTATAGTTAAAGATCTAG CAAAAGTAGAAAGTTTAGAATTTGGGCAAACAGGTTGTTCTCACGGTTATCAGTTAAGACCAGGTGATATTTATAAAGTT CAATCTGCAGATTTAATAATATATATAGACGATAGATTTGAGCATTATATGACTAAACTATCGTCGTTTTTTCAGTCGCA AGTAATCAGATTATCTGAAATTGAAGGGATAAGCTTAATTCATAATAGAGTAAGTACTAATTGGCATATTTGGTATGATA TTAATAATGTTAAATTAATATCATTAGAGCTTTATAAGCTATTTGAAAAACAATTCGATTCTTATGCAAGGCAAATGCTG TTTGAAAATTATCAAAAACTTATTGTACAGTTAAATATAATTCAGGAGAAACAGATTGATCTGTTTAAAATTTTATCTAC AGATATTATAGTGTTGGATAGTGCTATTGAGTATTTTTTTAACTGTAATAAAGCAAAAGTTATAAAAGTACCTACTAATT GCCATGGAGCAGTTACTTTAAGTACTATTCAACAAATTAAATCTTTATCTAAGGAAAGATCTTTATGTCTGATATTAGGA CAGAGACATGAAATAACACATCTGAGTGCATTATTTCATAATAAAATTAAAGTTGTTAGACTAAATAGTGAAATGTGTCC TACTAAGGAAGGTATTGATGATAAACTGATTTTATCTAAGTTATATGATATCATTGCTAAGTTACATGATTGTTTACCAC ATGGAAATGGAAGTTAA
Upstream 100 bases:
>100_bases AAAAGCAAGCTATTCAAGAAGTATTATTATATCTTAATCATGCTTGGATAAACAGTGATTTTACTCTTAATAAGCAAGAA TTAATCGATTTATTAAAGTT
Downstream 100 bases:
>100_bases ATGCTATAAAATGATGAAGGATTTACTTTAGGTATGAATATTACGTGATATATACTTGACTTTCAGTATTCAATGATAAT AATATTACTTGAATGGAGGT
Product: zinc/manganese ABC transporter substrate binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MIFFKLKLFRLSVIAFLIFNYCSINIIFAKKKLRIVTSNIPTAAIVKAIVKDLAKVESLEFGQTGCSHGYQLRPGDIYKV QSADLIIYIDDRFEHYMTKLSSFFQSQVIRLSEIEGISLIHNRVSTNWHIWYDINNVKLISLELYKLFEKQFDSYARQML FENYQKLIVQLNIIQEKQIDLFKILSTDIIVLDSAIEYFFNCNKAKVIKVPTNCHGAVTLSTIQQIKSLSKERSLCLILG QRHEITHLSALFHNKIKVVRLNSEMCPTKEGIDDKLILSKLYDIIAKLHDCLPHGNGS
Sequences:
>Translated_298_residues MIFFKLKLFRLSVIAFLIFNYCSINIIFAKKKLRIVTSNIPTAAIVKAIVKDLAKVESLEFGQTGCSHGYQLRPGDIYKV QSADLIIYIDDRFEHYMTKLSSFFQSQVIRLSEIEGISLIHNRVSTNWHIWYDINNVKLISLELYKLFEKQFDSYARQML FENYQKLIVQLNIIQEKQIDLFKILSTDIIVLDSAIEYFFNCNKAKVIKVPTNCHGAVTLSTIQQIKSLSKERSLCLILG QRHEITHLSALFHNKIKVVRLNSEMCPTKEGIDDKLILSKLYDIIAKLHDCLPHGNGS >Mature_298_residues MIFFKLKLFRLSVIAFLIFNYCSINIIFAKKKLRIVTSNIPTAAIVKAIVKDLAKVESLEFGQTGCSHGYQLRPGDIYKV QSADLIIYIDDRFEHYMTKLSSFFQSQVIRLSEIEGISLIHNRVSTNWHIWYDINNVKLISLELYKLFEKQFDSYARQML FENYQKLIVQLNIIQEKQIDLFKILSTDIIVLDSAIEYFFNCNKAKVIKVPTNCHGAVTLSTIQQIKSLSKERSLCLILG QRHEITHLSALFHNKIKVVRLNSEMCPTKEGIDDKLILSKLYDIIAKLHDCLPHGNGS
Specific function: Unknown
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 34395; Mature: 34395
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFFKLKLFRLSVIAFLIFNYCSINIIFAKKKLRIVTSNIPTAAIVKAIVKDLAKVESLE CEEEEHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCC FGQTGCSHGYQLRPGDIYKVQSADLIIYIDDRFEHYMTKLSSFFQSQVIRLSEIEGISLI CCCCCCCCCCCCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH HNRVSTNWHIWYDINNVKLISLELYKLFEKQFDSYARQMLFENYQKLIVQLNIIQEKQID HHHCCCCEEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LFKILSTDIIVLDSAIEYFFNCNKAKVIKVPTNCHGAVTLSTIQQIKSLSKERSLCLILG HHHHHHCCCEEHHHHHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHHHHHHCCCEEEEEC QRHEITHLSALFHNKIKVVRLNSEMCPTKEGIDDKLILSKLYDIIAKLHDCLPHGNGS CCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIFFKLKLFRLSVIAFLIFNYCSINIIFAKKKLRIVTSNIPTAAIVKAIVKDLAKVESLE CEEEEHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCC FGQTGCSHGYQLRPGDIYKVQSADLIIYIDDRFEHYMTKLSSFFQSQVIRLSEIEGISLI CCCCCCCCCCCCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH HNRVSTNWHIWYDINNVKLISLELYKLFEKQFDSYARQMLFENYQKLIVQLNIIQEKQID HHHCCCCEEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LFKILSTDIIVLDSAIEYFFNCNKAKVIKVPTNCHGAVTLSTIQQIKSLSKERSLCLILG HHHHHHCCCEEHHHHHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHHHHHHCCCEEEEEC QRHEITHLSALFHNKIKVVRLNSEMCPTKEGIDDKLILSKLYDIIAKLHDCLPHGNGS CCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]