| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is gltP [H]
Identifier: 189182929
GI number: 189182929
Start: 28031
End: 29230
Strand: Direct
Name: gltP [H]
Synonym: OTT_0022
Alternate gene names: 189182929
Gene position: 28031-29230 (Clockwise)
Preceding gene: 189182928
Following gene: 189182930
Centisome position: 1.4
GC content: 30.5
Gene sequence:
>1200_bases ATGATGTTATGGCAAAAAGTAATATTAGGTCTTGTATTAGGAGTAATCACTGGAATCGCATTTCCTGAATATGTTGATTA TATTAAACCAATAGGTGATATATTTCTACGCTTAATAAAAATGATTATTGCTCCATTGATATTTTTTTCATTAGTATCTG GCATTGTTAGTGTAAATGATTCAGACTCTTTAGGTAGGCTTGGTATTAAAGCTACTATTGCTTTTACATTGACAACTTTA TTTGCTGTATTGTTTGGCATTGGAATTGCTATTATTTTAAAGCCTGGAGTGGGTATAACTATTGATTTGCCTGTAAACCA TACTAATTTAGAGAGAGAAAAATTTGATGTAGTTAACTTTTTAATAAATATTGTTCCTGATAATGCTTTAGGAGCTATTG TTTACAGCAACATACTACAAGTTGTCTTTTTAGCAATATTTACTGGCATAACTCTTAATAAGATGTCTAACTCATCTACA TTACGTCAATTATTTAGTATTATTTCTAAAATGATTATGAAAATGATTTCGTTGATCATTTTATTGGCACCTTACGGAGC ATTTGCACTAACTGCATGGGTTGTTGGTAATCATGGTATTGGTATATTATTTGGGTTGTCTAAACTGATGTTTGCAATAG TATTAGCAATGATTATGCAATATTTAATTTTTGGTGTATTAATTATGGTGTTTTGTCGTATTTCTCCACTGCCGTTTTAT AGAAAAAGTATAGAATACCAAATTCTAGCTTTATCTACTAGTAGTAGCAAAGCTAGTTTAGTGACAACTATGGATGTTTG TAAGAATAAATTGGGAGTATCGAGTGCTACTACTAATTTTATTTTACCATTAGGAGCTTCTATTAATATGGATGGCTTTG CTATTAATCTAGCTTTAACTACAATTTTCTTTGCTCAACTTTTTGGCGTAACTTTACAGTTACATGATTATTTTGTCATA ATATTAATGGTGACAATAGGTACTATTGGTGGAGCAGGTATACCAGGTGCGTCATTAATTATGTTGCCTATGGTTCTTTC TGCTGTTAATCTACCTATTGAAGGTGTGGCAATTTTGGTTGGAATTGATAGAATACTTGATATGCTTAGAACTGTAATTA ATATTACAGGAGATGCAACTATTACACTGATTATTGATCAGTCAGAAGGAACTTTTGATGAAGAAACTTATTATTCTTAA
Upstream 100 bases:
>100_bases GAATGCGACTTTGCTTAATGCTAGCGCAGGTAACTTTAACCTATAGTATTAGTTTAAGATTGCGTTAATCTTATATTTTT AACTAAAAATGTCTTGTTTT
Downstream 100 bases:
>100_bases TAAAACATTAGCCTATTATATAGTGCTGATGTTTGTTGATATTTTGTAATACATGACAGAAATTCCTATCTGCATAATAT TTCCATCGCAAAATATTGAA
Product: proton/sodium-glutamate symport protein
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: C4-dicarboxylate permease [H]
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MMLWQKVILGLVLGVITGIAFPEYVDYIKPIGDIFLRLIKMIIAPLIFFSLVSGIVSVNDSDSLGRLGIKATIAFTLTTL FAVLFGIGIAIILKPGVGITIDLPVNHTNLEREKFDVVNFLINIVPDNALGAIVYSNILQVVFLAIFTGITLNKMSNSST LRQLFSIISKMIMKMISLIILLAPYGAFALTAWVVGNHGIGILFGLSKLMFAIVLAMIMQYLIFGVLIMVFCRISPLPFY RKSIEYQILALSTSSSKASLVTTMDVCKNKLGVSSATTNFILPLGASINMDGFAINLALTTIFFAQLFGVTLQLHDYFVI ILMVTIGTIGGAGIPGASLIMLPMVLSAVNLPIEGVAILVGIDRILDMLRTVINITGDATITLIIDQSEGTFDEETYYS
Sequences:
>Translated_399_residues MMLWQKVILGLVLGVITGIAFPEYVDYIKPIGDIFLRLIKMIIAPLIFFSLVSGIVSVNDSDSLGRLGIKATIAFTLTTL FAVLFGIGIAIILKPGVGITIDLPVNHTNLEREKFDVVNFLINIVPDNALGAIVYSNILQVVFLAIFTGITLNKMSNSST LRQLFSIISKMIMKMISLIILLAPYGAFALTAWVVGNHGIGILFGLSKLMFAIVLAMIMQYLIFGVLIMVFCRISPLPFY RKSIEYQILALSTSSSKASLVTTMDVCKNKLGVSSATTNFILPLGASINMDGFAINLALTTIFFAQLFGVTLQLHDYFVI ILMVTIGTIGGAGIPGASLIMLPMVLSAVNLPIEGVAILVGIDRILDMLRTVINITGDATITLIIDQSEGTFDEETYYS >Mature_399_residues MMLWQKVILGLVLGVITGIAFPEYVDYIKPIGDIFLRLIKMIIAPLIFFSLVSGIVSVNDSDSLGRLGIKATIAFTLTTL FAVLFGIGIAIILKPGVGITIDLPVNHTNLEREKFDVVNFLINIVPDNALGAIVYSNILQVVFLAIFTGITLNKMSNSST LRQLFSIISKMIMKMISLIILLAPYGAFALTAWVVGNHGIGILFGLSKLMFAIVLAMIMQYLIFGVLIMVFCRISPLPFY RKSIEYQILALSTSSSKASLVTTMDVCKNKLGVSSATTNFILPLGASINMDGFAINLALTTIFFAQLFGVTLQLHDYFVI ILMVTIGTIGGAGIPGASLIMLPMVLSAVNLPIEGVAILVGIDRILDMLRTVINITGDATITLIIDQSEGTFDEETYYS
Specific function: Responsible for the transport of succinate and fumarate, but not malate, across the membrane (Probable) [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI40254478, Length=435, Percent_Identity=28.9655172413793, Blast_Score=152, Evalue=7e-37, Organism=Homo sapiens, GI21314632, Length=407, Percent_Identity=29.97542997543, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI169790839, Length=443, Percent_Identity=28.4424379232506, Blast_Score=142, Evalue=4e-34, Organism=Homo sapiens, GI5032093, Length=375, Percent_Identity=29.8666666666667, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI66773030, Length=441, Percent_Identity=28.1179138321995, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI4827012, Length=264, Percent_Identity=31.4393939393939, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI223468566, Length=250, Percent_Identity=31.2, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI223468564, Length=250, Percent_Identity=31.2, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI194239697, Length=284, Percent_Identity=29.2253521126761, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI262359914, Length=404, Percent_Identity=27.2277227722772, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI301601644, Length=122, Percent_Identity=35.2459016393443, Blast_Score=89, Evalue=1e-17, Organism=Escherichia coli, GI1790514, Length=412, Percent_Identity=31.3106796116505, Blast_Score=207, Evalue=1e-54, Organism=Escherichia coli, GI1789947, Length=405, Percent_Identity=29.6296296296296, Blast_Score=192, Evalue=3e-50, Organism=Escherichia coli, GI1788024, Length=390, Percent_Identity=26.4102564102564, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1789473, Length=269, Percent_Identity=25.6505576208178, Blast_Score=85, Evalue=9e-18, Organism=Caenorhabditis elegans, GI71996953, Length=440, Percent_Identity=28.4090909090909, Blast_Score=165, Evalue=3e-41, Organism=Caenorhabditis elegans, GI71983099, Length=435, Percent_Identity=30.3448275862069, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI71983106, Length=435, Percent_Identity=30.3448275862069, Blast_Score=162, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17537407, Length=418, Percent_Identity=29.6650717703349, Blast_Score=158, Evalue=4e-39, Organism=Caenorhabditis elegans, GI193206505, Length=447, Percent_Identity=26.1744966442953, Blast_Score=137, Evalue=8e-33, Organism=Caenorhabditis elegans, GI193206654, Length=401, Percent_Identity=28.1795511221945, Blast_Score=134, Evalue=7e-32, Organism=Caenorhabditis elegans, GI17541374, Length=400, Percent_Identity=27.25, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI24583025, Length=426, Percent_Identity=26.7605633802817, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI17137668, Length=426, Percent_Identity=26.7605633802817, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24583023, Length=426, Percent_Identity=26.7605633802817, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI281360481, Length=447, Percent_Identity=25.9507829977629, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI281360483, Length=447, Percent_Identity=25.9507829977629, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI17137666, Length=447, Percent_Identity=25.9507829977629, Blast_Score=110, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43252; Mature: 43252
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00713 NA_DICARBOXYL_SYMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLWQKVILGLVLGVITGIAFPEYVDYIKPIGDIFLRLIKMIIAPLIFFSLVSGIVSVND CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC SDSLGRLGIKATIAFTLTTLFAVLFGIGIAIILKPGVGITIDLPVNHTNLEREKFDVVNF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCHHHHHHHHHH LINIVPDNALGAIVYSNILQVVFLAIFTGITLNKMSNSSTLRQLFSIISKMIMKMISLII HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLAPYGAFALTAWVVGNHGIGILFGLSKLMFAIVLAMIMQYLIFGVLIMVFCRISPLPFY HHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RKSIEYQILALSTSSSKASLVTTMDVCKNKLGVSSATTNFILPLGASINMDGFAINLALT HHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHH TIFFAQLFGVTLQLHDYFVIILMVTIGTIGGAGIPGASLIMLPMVLSAVNLPIEGVAILV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH GIDRILDMLRTVINITGDATITLIIDQSEGTFDEETYYS HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MMLWQKVILGLVLGVITGIAFPEYVDYIKPIGDIFLRLIKMIIAPLIFFSLVSGIVSVND CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC SDSLGRLGIKATIAFTLTTLFAVLFGIGIAIILKPGVGITIDLPVNHTNLEREKFDVVNF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCHHHHHHHHHH LINIVPDNALGAIVYSNILQVVFLAIFTGITLNKMSNSSTLRQLFSIISKMIMKMISLII HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLAPYGAFALTAWVVGNHGIGILFGLSKLMFAIVLAMIMQYLIFGVLIMVFCRISPLPFY HHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RKSIEYQILALSTSSSKASLVTTMDVCKNKLGVSSATTNFILPLGASINMDGFAINLALT HHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHH TIFFAQLFGVTLQLHDYFVIILMVTIGTIGGAGIPGASLIMLPMVLSAVNLPIEGVAILV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH GIDRILDMLRTVINITGDATITLIIDQSEGTFDEETYYS HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 10708364 [H]