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The map label for this gene is yqiX [H]

Identifier: 189182925

GI number: 189182925

Start: 22157

End: 22960

Strand: Direct

Name: yqiX [H]

Synonym: OTT_0018

Alternate gene names: 189182925

Gene position: 22157-22960 (Clockwise)

Preceding gene: 189182923

Following gene: 189182926

Centisome position: 1.1

GC content: 28.23

Gene sequence:

>804_bases
ATGTATGATGCTGATAAAGGTTCTAAAGTTAAAAGGAAATTTTTTATGACTAAACGCTCACTTATGTTCATTATTGTATT
AATATTGATTTTGCTAAGCTATTTAGCCTATATAAAAATTCAATCGAAGAACCAGTATGTAAAAAGCAATGTATTATTGG
TAGGAACAGCTGCTGATAATCCACCATATGAATTCTTTAAAGACGATGAAATTGTTGGTCTAGATATTGATATAGTTAAG
CTAATTGGTCAAGATTTAGGAAAAGAAGTAGTAATTAAAAATTTTGATTTTCCTGGGTTATTGCTTGCTCTGTCTTCCAA
GCAGCTAGATTTAGTTATAGCTGGTTTATCTAAGTCTGATCAAAGAAAAGAGTATGTAAATTTTAGCAATGTTTACCTAA
CATCAAAAGTTGCTGTGTTATTTAGAACTGATAGTAATTTTGCTGATTGTCAAGATATTAAAGGTAAAATTATTGGTGCT
CAGCTTGGCACAACTTGGCAGAACATAGCTGAGAATATTAACAAAGATAGCGATAATTCAAAGTTACGGTTTCTTGATAA
TAATTTAATTTTAGTTGAAGAACTGAAGTCTAAAATTATTGATGCAGTTATTCTTGAAGATATACAAGCTGCTAAATTTG
TTGCTGATAATCCTAAACTTAAAAAATTTATTATTGATGACAGTATTTCTGAATTTGTTATTGCGTCTTCTAAAGGTAGT
AACTTAATAGCTGAAGTTAATAAGTCGATATTAAAACTTCAAAATAATGGTATAATAACTAAGTTAAAACAAAAATGGTA
TTAA

Upstream 100 bases:

>100_bases
CAGCATCAAATATCAAGCTCGGGTTTTTAAGTAATTATTTTGATATTTTTGTGGAAGTTATGAATATTACATGTGCTTGT
AATTTAATGGTGCAAGTATT

Downstream 100 bases:

>100_bases
TAGCTAATGATAGAAAATAGTGCTGTTATAAGAGTAGGTGTATGTGGTGCAAGTGGTAGAATGGGGCAAGAGGTTACTAA
AATAATCAATAATCAGGCTC

Product: amino acid ABC transporter substrate binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MYDADKGSKVKRKFFMTKRSLMFIIVLILILLSYLAYIKIQSKNQYVKSNVLLVGTAADNPPYEFFKDDEIVGLDIDIVK
LIGQDLGKEVVIKNFDFPGLLLALSSKQLDLVIAGLSKSDQRKEYVNFSNVYLTSKVAVLFRTDSNFADCQDIKGKIIGA
QLGTTWQNIAENINKDSDNSKLRFLDNNLILVEELKSKIIDAVILEDIQAAKFVADNPKLKKFIIDDSISEFVIASSKGS
NLIAEVNKSILKLQNNGIITKLKQKWY

Sequences:

>Translated_267_residues
MYDADKGSKVKRKFFMTKRSLMFIIVLILILLSYLAYIKIQSKNQYVKSNVLLVGTAADNPPYEFFKDDEIVGLDIDIVK
LIGQDLGKEVVIKNFDFPGLLLALSSKQLDLVIAGLSKSDQRKEYVNFSNVYLTSKVAVLFRTDSNFADCQDIKGKIIGA
QLGTTWQNIAENINKDSDNSKLRFLDNNLILVEELKSKIIDAVILEDIQAAKFVADNPKLKKFIIDDSISEFVIASSKGS
NLIAEVNKSILKLQNNGIITKLKQKWY
>Mature_267_residues
MYDADKGSKVKRKFFMTKRSLMFIIVLILILLSYLAYIKIQSKNQYVKSNVLLVGTAADNPPYEFFKDDEIVGLDIDIVK
LIGQDLGKEVVIKNFDFPGLLLALSSKQLDLVIAGLSKSDQRKEYVNFSNVYLTSKVAVLFRTDSNFADCQDIKGKIIGA
QLGTTWQNIAENINKDSDNSKLRFLDNNLILVEELKSKIIDAVILEDIQAAKFVADNPKLKKFIIDDSISEFVIASSKGS
NLIAEVNKSILKLQNNGIITKLKQKWY

Specific function: Part of a binding-protein-dependent transport system for arginine [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=259, Percent_Identity=27.027027027027, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787031, Length=222, Percent_Identity=30.1801801801802, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787085, Length=222, Percent_Identity=23.8738738738739, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1787088, Length=228, Percent_Identity=22.8070175438596, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 30068; Mature: 30068

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDADKGSKVKRKFFMTKRSLMFIIVLILILLSYLAYIKIQSKNQYVKSNVLLVGTAADN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCEEEEEECCCC
PPYEFFKDDEIVGLDIDIVKLIGQDLGKEVVIKNFDFPGLLLALSSKQLDLVIAGLSKSD
CCHHHCCCCCEEECCHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCC
QRKEYVNFSNVYLTSKVAVLFRTDSNFADCQDIKGKIIGAQLGTTWQNIAENINKDSDNS
CHHHHCCHHHEEEEEEEEEEEEECCCCCCHHHCCCEEEECHHCCHHHHHHHHCCCCCCCC
KLRFLDNNLILVEELKSKIIDAVILEDIQAAKFVADNPKLKKFIIDDSISEFVIASSKGS
EEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCC
NLIAEVNKSILKLQNNGIITKLKQKWY
HHHHHHHHHHHEECCCCCEEHHHHCCC
>Mature Secondary Structure
MYDADKGSKVKRKFFMTKRSLMFIIVLILILLSYLAYIKIQSKNQYVKSNVLLVGTAADN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCEEEEEECCCC
PPYEFFKDDEIVGLDIDIVKLIGQDLGKEVVIKNFDFPGLLLALSSKQLDLVIAGLSKSD
CCHHHCCCCCEEECCHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCC
QRKEYVNFSNVYLTSKVAVLFRTDSNFADCQDIKGKIIGAQLGTTWQNIAENINKDSDNS
CHHHHCCHHHEEEEEEEEEEEEECCCCCCHHHCCCEEEECHHCCHHHHHHHHCCCCCCCC
KLRFLDNNLILVEELKSKIIDAVILEDIQAAKFVADNPKLKKFIIDDSISEFVIASSKGS
EEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCC
NLIAEVNKSILKLQNNGIITKLKQKWY
HHHHHHHHHHHEECCCCCEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]