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The map label for this gene is 189026223

Identifier: 189026223

GI number: 189026223

Start: 1090069

End: 1090740

Strand: Direct

Name: 189026223

Synonym: TPASS_1000

Alternate gene names: NA

Gene position: 1090069-1090740 (Clockwise)

Preceding gene: 189026222

Following gene: 189026226

Centisome position: 95.67

GC content: 53.27

Gene sequence:

>672_bases
ATGCAAGCAGGCGATACCCTGCCCTTTTATTCCAACGCCGATTACCAGCCTCACAGGAGGAAGGGTGTCTGCAGTGCGGC
GCACCGCGCGGATGTACAGCGGGGAGAGACAATGATGAGAGAGGACGTACGGATGCACGTATTGAGAAGAAGGATAAGTT
TCCATTACCGCGTAGATCCACTCAAAGGCGATAGTTTCGAGAACAACTGGGCAAACAACAGTTGTGATACAATGCAACTA
CAGGATAAAGCGGGACGGGTGCTGTATGGCGCGATGGTACAAACCGTGGCGAATTATTGTTTCGGGCGGATGGCACCGGG
GTCTGGGGTGGCACATGGGGAATCGGTTGCGCCGGGGGCATTTGTAGTGCGTTGCTTTGTGCCTGCCCGCGCGTTTCATG
GACGGATACACGCAATCACACGCACATGGGATATGGATGGAGAGTGGATTGATCGGGAAGCGATGCAAATATCTACAGAA
GGATATCAGACCGGTCGGTGGTTAATACACGACCGGTGGTCAGAAAAGTTAGGGCGCGACACGAATTATGCGTGGAGTGC
AGGGTGCTTCGTGCTTTCAAGTGAGGATCTGCGACGGATGAACGAGGTGTTGGACAGATGGGGAGTATCCTGTGGGCAAG
AAATGGCAGGAATTCTTGAGGAACTCGAATGA

Upstream 100 bases:

>100_bases
GTCCACGGGTAAAAAAGGTGAGGCACGATGCACCGGAGGCTGCCGGAAGGGTAGTCAGTGACTGCGCGATGCGCGCCTTC
TTCTCAGGAAGGGCGGCAGA

Downstream 100 bases:

>100_bases
TCAGCGTAGGAGAAGGGATGTGGACACGCAAAAGCGGCCGCTGTAGAACCCGACAAGCTTTTGGTTTCAGAGCAAGCGCC
AAGACCTAAGCAGGGTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MQAGDTLPFYSNADYQPHRRKGVCSAAHRADVQRGETMMREDVRMHVLRRRISFHYRVDPLKGDSFENNWANNSCDTMQL
QDKAGRVLYGAMVQTVANYCFGRMAPGSGVAHGESVAPGAFVVRCFVPARAFHGRIHAITRTWDMDGEWIDREAMQISTE
GYQTGRWLIHDRWSEKLGRDTNYAWSAGCFVLSSEDLRRMNEVLDRWGVSCGQEMAGILEELE

Sequences:

>Translated_223_residues
MQAGDTLPFYSNADYQPHRRKGVCSAAHRADVQRGETMMREDVRMHVLRRRISFHYRVDPLKGDSFENNWANNSCDTMQL
QDKAGRVLYGAMVQTVANYCFGRMAPGSGVAHGESVAPGAFVVRCFVPARAFHGRIHAITRTWDMDGEWIDREAMQISTE
GYQTGRWLIHDRWSEKLGRDTNYAWSAGCFVLSSEDLRRMNEVLDRWGVSCGQEMAGILEELE
>Mature_223_residues
MQAGDTLPFYSNADYQPHRRKGVCSAAHRADVQRGETMMREDVRMHVLRRRISFHYRVDPLKGDSFENNWANNSCDTMQL
QDKAGRVLYGAMVQTVANYCFGRMAPGSGVAHGESVAPGAFVVRCFVPARAFHGRIHAITRTWDMDGEWIDREAMQISTE
GYQTGRWLIHDRWSEKLGRDTNYAWSAGCFVLSSEDLRRMNEVLDRWGVSCGQEMAGILEELE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YA00_TREPA (O83965)

Other databases:

- EMBL:   AE000520
- PIR:   B71254
- RefSeq:   NP_219437.1
- ProteinModelPortal:   O83965
- GeneID:   2610760
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP1000
- NMPDR:   fig|243276.1.peg.995
- TIGR:   TP_1000
- HOGENOM:   HBG251107
- ProtClustDB:   CLSK2300349
- BioCyc:   TPAL243276:TP_1000-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25429; Mature: 25429

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAGDTLPFYSNADYQPHRRKGVCSAAHRADVQRGETMMREDVRMHVLRRRISFHYRVDP
CCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
LKGDSFENNWANNSCDTMQLQDKAGRVLYGAMVQTVANYCFGRMAPGSGVAHGESVAPGA
CCCCCCCCCCCCCCCCCEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
FVVRCFVPARAFHGRIHAITRTWDMDGEWIDREAMQISTEGYQTGRWLIHDRWSEKLGRD
HHHHHHHHHHHHCCEEEEEEEEECCCCCHHCHHHHHHCCCCCCCCCEEEECHHHHHHCCC
TNYAWSAGCFVLSSEDLRRMNEVLDRWGVSCGQEMAGILEELE
CCCEEECCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MQAGDTLPFYSNADYQPHRRKGVCSAAHRADVQRGETMMREDVRMHVLRRRISFHYRVDP
CCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
LKGDSFENNWANNSCDTMQLQDKAGRVLYGAMVQTVANYCFGRMAPGSGVAHGESVAPGA
CCCCCCCCCCCCCCCCCEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
FVVRCFVPARAFHGRIHAITRTWDMDGEWIDREAMQISTEGYQTGRWLIHDRWSEKLGRD
HHHHHHHHHHHHCCEEEEEEEEECCCCCHHCHHHHHHCCCCCCCCCEEEECHHHHHHCCC
TNYAWSAGCFVLSSEDLRRMNEVLDRWGVSCGQEMAGILEELE
CCCEEECCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876