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The map label for this gene is 189026214

Identifier: 189026214

GI number: 189026214

Start: 1078134

End: 1078292

Strand: Direct

Name: 189026214

Synonym: TPASS_0991

Alternate gene names: NA

Gene position: 1078134-1078292 (Clockwise)

Preceding gene: 189026213

Following gene: 189026215

Centisome position: 94.62

GC content: 54.09

Gene sequence:

>159_bases
ATGGGAACGTACATGTGTGATTTGTGTGGCTGGGGATACAATCCAGAGGTAGGGGATGCAGACGGGGGCATTCCCGCGGG
TACTGCGTTTGAGAACCTACCGGACCACTGGGAGTGTCCACTCTGTGGGGTGGACAAGACAAGTTTTGTGAAAGTGTAG

Upstream 100 bases:

>100_bases
CGAAGAACCGCCCATCCAAAAGGAACAAGAGAACTAGCCAACGGTGCCCGCTTGCCTGCATGACCGAAACAGGGTAGTCT
CCCCTGAGAGGAGGCGACTG

Downstream 100 bases:

>100_bases
CTCTTCTGCCTAGAGGAAAGGGGAACGATCCAGTGAAAAAAAAGGACGCTTTCGTCGGTACGATCGGCTACGACGGTCAA
CGGGCAGTAGTGGACAGGGC

Product: rubredoxin

Products: NA

Alternate protein names: Rd

Number of amino acids: Translated: 52; Mature: 51

Protein sequence:

>52_residues
MGTYMCDLCGWGYNPEVGDADGGIPAGTAFENLPDHWECPLCGVDKTSFVKV

Sequences:

>Translated_52_residues
MGTYMCDLCGWGYNPEVGDADGGIPAGTAFENLPDHWECPLCGVDKTSFVKV
>Mature_51_residues
GTYMCDLCGWGYNPEVGDADGGIPAGTAFENLPDHWECPLCGVDKTSFVKV

Specific function: Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule

COG id: COG1773

COG function: function code C; Rubredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUBR_TREPA (O83956)

Other databases:

- EMBL:   AE000520
- PIR:   G71256
- RefSeq:   NP_219428.1
- ProteinModelPortal:   O83956
- SMR:   O83956
- IntAct:   O83956
- GeneID:   2611597
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0991
- NMPDR:   fig|243276.1.peg.986
- TIGR:   TP_0991
- HOGENOM:   HBG545811
- OMA:   SGTEFKD
- ProtClustDB:   CLSK2300346
- BioCyc:   TPAL243276:TP_0991-MONOMER
- GO:   GO:0006810
- InterPro:   IPR004039
- InterPro:   IPR018527
- Gene3D:   G3DSA:2.20.28.10
- PRINTS:   PR00163

Pfam domain/function: PF00301 Rubredoxin

EC number: NA

Molecular weight: Translated: 5568; Mature: 5437

Theoretical pI: Translated: 3.83; Mature: 3.83

Prosite motif: PS00202 RUBREDOXIN; PS50903 RUBREDOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
11.5 %Cys+Met (Translated Protein)
7.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTYMCDLCGWGYNPEVGDADGGIPAGTAFENLPDHWECPLCGVDKTSFVKV
CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
GTYMCDLCGWGYNPEVGDADGGIPAGTAFENLPDHWECPLCGVDKTSFVKV
CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876