| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189026133
Identifier: 189026133
GI number: 189026133
Start: 990428
End: 991348
Strand: Direct
Name: 189026133
Synonym: TPASS_0910
Alternate gene names: NA
Gene position: 990428-991348 (Clockwise)
Preceding gene: 189026132
Following gene: 189026134
Centisome position: 86.92
GC content: 57.11
Gene sequence:
>921_bases GTGAACGGAGCTGTTCGGGTAGTACTCACCGAAGTGCCGCGCACGGTTTCCCTTACTGAAGGGGCGCTCGTGTGCGTCCG CATTCTCAGCAGCACGCACGCCGGCCGTGCGCTTGTCGCCATTAACGGTGAACGGGTGCGCGCGCGTGTACCGCAGCCTA TGCACAAAGGCGCAGTCCTGTTTCTGCGCGCGTCTATCCGCGCGGGTACGGTGTTCCTGCACCCGCAGTGCACGAGCACT CCTCCATCTGCTGAGGATATGTCGGCGCATTTTTTGCAGCGCTGGGGTGTTTCTTTCTCTCCTGAAGCTGCAGCGCTTAT CCACGCGCATACATCCCTGTGTGTGCCGCTGCAGCCGCAGCTCATTGAGCGCTTTGCGCTTTTGCTAAAAAAGTTTCCTG AGCAAAAAAGAGCACACGCCGCGTTCCTTGCGAGTATCTTAGGCGACCGAAACATTCCCGTTGATGCAGCGATGCTCCGC CGTATGCTGAGCACCTTTCTTGGGGAATCAGGCGCATACACAGACTCTGACACGGAGCGAGATCTCTTTGCGCTCGTTAA CCACACATATCACTCAGCACTCCACTGGCTTCTTGTACCCTTTGAGCGGCGCGGCGCGCACACCGTGTGGCGCGGCACTC TCTCGCTGTTATTACACCTCCACAAAAAAACATGCACCCAGCTGCGCGTACGTGCGTGTAACACTGCAGGAGAATGGGTC TTCTGCGTGCAGAATAACGTACTCACGGTGCAAAGACACGCGGCACGGGAACTGTCGCGCACAGCGCAGAAAAAAACAGT TGCACGCCTGTGTGCCCTCCTTCGCGAACGCGGCATTGATTTTTTATCCGTACGGTATGGTGCGCATGCAGACTCGGCAA ACGATGCGGTCCCCTTCAAAGGGATTGACGTTTCTGTATAG
Upstream 100 bases:
>100_bases CAGGAAAGGTGCGACGCGCGAAGCTCTATTACATCCGAGAAAAAATAGGAAAGGCCGCCCGTATCAAAGCACGTATTGTT AAAAAGCCGTCGCCCAGCGC
Downstream 100 bases:
>100_bases CAGACGCACACTACCGCCACCATGAAAAGAAAGCGTGCGTGCTCGGTTGCGCTCTCCTATGCAACGGGAGATAAGGCGCC CATTATTGTCGCTTCGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MNGAVRVVLTEVPRTVSLTEGALVCVRILSSTHAGRALVAINGERVRARVPQPMHKGAVLFLRASIRAGTVFLHPQCTST PPSAEDMSAHFLQRWGVSFSPEAAALIHAHTSLCVPLQPQLIERFALLLKKFPEQKRAHAAFLASILGDRNIPVDAAMLR RMLSTFLGESGAYTDSDTERDLFALVNHTYHSALHWLLVPFERRGAHTVWRGTLSLLLHLHKKTCTQLRVRACNTAGEWV FCVQNNVLTVQRHAARELSRTAQKKTVARLCALLRERGIDFLSVRYGAHADSANDAVPFKGIDVSV
Sequences:
>Translated_306_residues MNGAVRVVLTEVPRTVSLTEGALVCVRILSSTHAGRALVAINGERVRARVPQPMHKGAVLFLRASIRAGTVFLHPQCTST PPSAEDMSAHFLQRWGVSFSPEAAALIHAHTSLCVPLQPQLIERFALLLKKFPEQKRAHAAFLASILGDRNIPVDAAMLR RMLSTFLGESGAYTDSDTERDLFALVNHTYHSALHWLLVPFERRGAHTVWRGTLSLLLHLHKKTCTQLRVRACNTAGEWV FCVQNNVLTVQRHAARELSRTAQKKTVARLCALLRERGIDFLSVRYGAHADSANDAVPFKGIDVSV >Mature_306_residues MNGAVRVVLTEVPRTVSLTEGALVCVRILSSTHAGRALVAINGERVRARVPQPMHKGAVLFLRASIRAGTVFLHPQCTST PPSAEDMSAHFLQRWGVSFSPEAAALIHAHTSLCVPLQPQLIERFALLLKKFPEQKRAHAAFLASILGDRNIPVDAAMLR RMLSTFLGESGAYTDSDTERDLFALVNHTYHSALHWLLVPFERRGAHTVWRGTLSLLLHLHKKTCTQLRVRACNTAGEWV FCVQNNVLTVQRHAARELSRTAQKKTVARLCALLRERGIDFLSVRYGAHADSANDAVPFKGIDVSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y910_TREPA (O83880)
Other databases:
- EMBL: AE000520 - PIR: C71268 - RefSeq: NP_219345.1 - ProteinModelPortal: O83880 - GeneID: 2611229 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0910 - NMPDR: fig|243276.1.peg.904 - TIGR: TP_0910 - HOGENOM: HBG732158 - OMA: EDESWIF - ProtClustDB: CLSK218921 - BioCyc: TPAL243276:TP_0910-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33815; Mature: 33815
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGAVRVVLTEVPRTVSLTEGALVCVRILSSTHAGRALVAINGERVRARVPQPMHKGAVL CCCEEEEEEECCCCEEECCCHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCEEE FLRASIRAGTVFLHPQCTSTPPSAEDMSAHFLQRWGVSFSPEAAALIHAHTSLCVPLQPQ EEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHEEEECCCEECCCCHH LIERFALLLKKFPEQKRAHAAFLASILGDRNIPVDAAMLRRMLSTFLGESGAYTDSDTER HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHH DLFALVNHTYHSALHWLLVPFERRGAHTVWRGTLSLLLHLHKKTCTQLRVRACNTAGEWV HHHHHHHHHHHHHHHHHEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE FCVQNNVLTVQRHAARELSRTAQKKTVARLCALLRERGIDFLSVRYGAHADSANDAVPFK EEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC GIDVSV CCEECC >Mature Secondary Structure MNGAVRVVLTEVPRTVSLTEGALVCVRILSSTHAGRALVAINGERVRARVPQPMHKGAVL CCCEEEEEEECCCCEEECCCHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCEEE FLRASIRAGTVFLHPQCTSTPPSAEDMSAHFLQRWGVSFSPEAAALIHAHTSLCVPLQPQ EEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHEEEECCCEECCCCHH LIERFALLLKKFPEQKRAHAAFLASILGDRNIPVDAAMLRRMLSTFLGESGAYTDSDTER HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHH DLFALVNHTYHSALHWLLVPFERRGAHTVWRGTLSLLLHLHKKTCTQLRVRACNTAGEWV HHHHHHHHHHHHHHHHHEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE FCVQNNVLTVQRHAARELSRTAQKKTVARLCALLRERGIDFLSVRYGAHADSANDAVPFK EEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC GIDVSV CCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876