| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189026092
Identifier: 189026092
GI number: 189026092
Start: 949468
End: 949704
Strand: Direct
Name: 189026092
Synonym: TPASS_0869
Alternate gene names: NA
Gene position: 949468-949704 (Clockwise)
Preceding gene: 189026091
Following gene: 189026093
Centisome position: 83.33
GC content: 55.27
Gene sequence:
>237_bases GTGCGCTCTTGTCCAAAAAGGGCAAGAGGAGTACACTGGGCCACAGGGGCTGCCCTGTGGTGCCCTTCTAGAATGATCTT TGAAAAGATTTCTCCCTTGCAGGCCTTCGTGTGGGCGGTTCTGAGGCTTTTTCTAAAAAGCTTCAGAACCGTTTTCCGTG GCGCGGTGCGTGCAGGGTGCGGCGTGCTCGCCTGCGTCCGTGCATACGGTTTTCCACCCTATGGATCAAAGGAATAG
Upstream 100 bases:
>100_bases AGAATCAGGTGCTCACCCAGTCTGGCACTGCAATGCTTGCGCAGGCGAACACCAGCGCGCAGTCGATTCTCTCAATTCTC CGGTAAGCCGGCTACGCCGC
Downstream 100 bases:
>100_bases AGGTGGAAGGACTTCAGGGAGGGTCATATGATTATCAATCACAACATGAGTGCGATGTTCGCGCAACGCCAGGGAGGCAT CAACGGACTTGCAATTGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MRSCPKRARGVHWATGAALWCPSRMIFEKISPLQAFVWAVLRLFLKSFRTVFRGAVRAGCGVLACVRAYGFPPYGSKE
Sequences:
>Translated_78_residues MRSCPKRARGVHWATGAALWCPSRMIFEKISPLQAFVWAVLRLFLKSFRTVFRGAVRAGCGVLACVRAYGFPPYGSKE >Mature_78_residues MRSCPKRARGVHWATGAALWCPSRMIFEKISPLQAFVWAVLRLFLKSFRTVFRGAVRAGCGVLACVRAYGFPPYGSKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y869_TREPA (O83839)
Other databases:
- EMBL: AE000520 - PIR: C71270 - RefSeq: NP_219304.1 - ProteinModelPortal: O83839 - IntAct: O83839 - GeneID: 2611106 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0869 - NMPDR: fig|243276.1.peg.863 - TIGR: TP_0869 - HOGENOM: HBG732140 - ProtClustDB: CLSK2300322 - BioCyc: TPAL243276:TP_0869-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8736; Mature: 8736
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSCPKRARGVHWATGAALWCPSRMIFEKISPLQAFVWAVLRLFLKSFRTVFRGAVRAGC CCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLACVRAYGFPPYGSKE HHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRSCPKRARGVHWATGAALWCPSRMIFEKISPLQAFVWAVLRLFLKSFRTVFRGAVRAGC CCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLACVRAYGFPPYGSKE HHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876