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The map label for this gene is 189026083

Identifier: 189026083

GI number: 189026083

Start: 937162

End: 937860

Strand: Direct

Name: 189026083

Synonym: TPASS_0859

Alternate gene names: NA

Gene position: 937162-937860 (Clockwise)

Preceding gene: 189026082

Following gene: 189026084

Centisome position: 82.25

GC content: 64.52

Gene sequence:

>699_bases
TTGGTGCGGCGGCCGTGTGTGTCGGCTGCGCCAGTACGCGTAGGAGGACGATTGGTGTTCGGTTTTGCACGCGTCGGTTC
GCGCGGGCTCTGCTTGGGGGCCCTCCTGCTCTCCCCTCGCATCGTGTTGGCACAGCACGTTGCTGACGCTCCTTTGGGCG
CACGCGGGGTTGTTCCGCGCAGCTCCTTGCCTCGGCGCACGCGGGCGGCCCGGGCTACGACGCTGCGATCTCGGGGCGGC
GTGGTCAGTTCCCGCGCGAGCGGGGGAACGCTCGTGGTCACCGCGCAGAAACCGAAGGTCATGGCACGAAATGACGTGGA
CTACCGTCCGCTCTCCCTGCAGGCCGGCGGCAGACAAGGCTCGTTGGACCTTGTTGCCACCGCAACGGCGGATGACGCCA
GCTTCTTTGAAGCGAACGCCGCAGGAAGCGCCACCATACCGCGCATGACGCTCGCCTTTTTTCACACCATGCGCATTTCC
GACTCCCACATAGACGTACTTTCCTTTGTCGGGCGGGCGGGGCGCACCGGCTACGGCGTTTCGGCACGCGCCTTTTACCC
AGACATGTCCAGCAAAACCACCGGCTTCGTGGGAATTTTTAACGTATCGCACGCTTTCTCTTCCGCCTATCGCTTTAAGG
GCGTGAGCGTGGGCGCAAACCTTAAGGTGGGGTATCGCCACACCCGGGGGGGGGGGTAG

Upstream 100 bases:

>100_bases
ACTGCTCGGCCGAAATTAATTCATAATATGCCGGGGCGCCCGCCGGTGCCCTGCTGAAGAATGCGGAGCGGCAAGACGTG
GAGGGGGTTTTGCCGCTTTT

Downstream 100 bases:

>100_bases
CAGCCAGTCAAAGAGCTCCAACGGGAAGGAGAACCACCACATAGTCCTGACCGCGGACGTAGGGGTGCGCGGTGCGTGGA
CGGTGTCTAAAAACTTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MVRRPCVSAAPVRVGGRLVFGFARVGSRGLCLGALLLSPRIVLAQHVADAPLGARGVVPRSSLPRRTRAARATTLRSRGG
VVSSRASGGTLVVTAQKPKVMARNDVDYRPLSLQAGGRQGSLDLVATATADDASFFEANAAGSATIPRMTLAFFHTMRIS
DSHIDVLSFVGRAGRTGYGVSARAFYPDMSSKTTGFVGIFNVSHAFSSAYRFKGVSVGANLKVGYRHTRGGG

Sequences:

>Translated_232_residues
MVRRPCVSAAPVRVGGRLVFGFARVGSRGLCLGALLLSPRIVLAQHVADAPLGARGVVPRSSLPRRTRAARATTLRSRGG
VVSSRASGGTLVVTAQKPKVMARNDVDYRPLSLQAGGRQGSLDLVATATADDASFFEANAAGSATIPRMTLAFFHTMRIS
DSHIDVLSFVGRAGRTGYGVSARAFYPDMSSKTTGFVGIFNVSHAFSSAYRFKGVSVGANLKVGYRHTRGGG
>Mature_232_residues
MVRRPCVSAAPVRVGGRLVFGFARVGSRGLCLGALLLSPRIVLAQHVADAPLGARGVVPRSSLPRRTRAARATTLRSRGG
VVSSRASGGTLVVTAQKPKVMARNDVDYRPLSLQAGGRQGSLDLVATATADDASFFEANAAGSATIPRMTLAFFHTMRIS
DSHIDVLSFVGRAGRTGYGVSARAFYPDMSSKTTGFVGIFNVSHAFSSAYRFKGVSVGANLKVGYRHTRGGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0164 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y859_TREPA (O83831)

Other databases:

- EMBL:   AE000520
- EMBL:   AE000520
- PIR:   C71272
- PIR:   D71272
- RefSeq:   NP_219295.1
- RefSeq:   NP_219296.1
- IntAct:   O83831
- GeneID:   2611067
- GeneID:   2611068
- TIGR:   TP_0859
- TIGR:   TP_0860
- BioCyc:   TPAL243276:TP_0859-MONOMER
- BioCyc:   TPAL243276:TP_0860-MONOMER
- InterPro:   IPR005362

Pfam domain/function: PF03687 UPF0164

EC number: NA

Molecular weight: Translated: 24340; Mature: 24340

Theoretical pI: Translated: 12.22; Mature: 12.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRPCVSAAPVRVGGRLVFGFARVGSRGLCLGALLLSPRIVLAQHVADAPLGARGVVPR
CCCCCCCCCCCEEECCEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC
SSLPRRTRAARATTLRSRGGVVSSRASGGTLVVTAQKPKVMARNDVDYRPLSLQAGGRQG
CCCCCHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCEEECCCCCCCEEEEECCCCCC
SLDLVATATADDASFFEANAAGSATIPRMTLAFFHTMRISDSHIDVLSFVGRAGRTGYGV
CEEEEEEECCCCCHHEECCCCCCCCCHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCCCC
SARAFYPDMSSKTTGFVGIFNVSHAFSSAYRFKGVSVGANLKVGYRHTRGGG
EEEEECCCCCCCCCCEEEEEEHHHHHHHHHHCCCEECCCCEEECEEECCCCC
>Mature Secondary Structure
MVRRPCVSAAPVRVGGRLVFGFARVGSRGLCLGALLLSPRIVLAQHVADAPLGARGVVPR
CCCCCCCCCCCEEECCEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC
SSLPRRTRAARATTLRSRGGVVSSRASGGTLVVTAQKPKVMARNDVDYRPLSLQAGGRQG
CCCCCHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCEEECCCCCCCEEEEECCCCCC
SLDLVATATADDASFFEANAAGSATIPRMTLAFFHTMRISDSHIDVLSFVGRAGRTGYGV
CEEEEEEECCCCCHHEECCCCCCCCCHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCCCC
SARAFYPDMSSKTTGFVGIFNVSHAFSSAYRFKGVSVGANLKVGYRHTRGGG
EEEEECCCCCCCCCCEEEEEEHHHHHHHHHHCCCEECCCCEEECEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876