Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

Click here to switch to the map view.

The map label for this gene is 189026064

Identifier: 189026064

GI number: 189026064

Start: 912312

End: 914561

Strand: Direct

Name: 189026064

Synonym: TPASS_0840

Alternate gene names: NA

Gene position: 912312-914561 (Clockwise)

Preceding gene: 189026061

Following gene: 189026068

Centisome position: 80.07

GC content: 49.78

Gene sequence:

>2250_bases
ATGAGTGGGGAATATCAATCTTTCACGCTCAAGCGTGCGCGACGCGTCTATGACCAGTATAATGTGATTAACTCCCTTTC
GTTCGCACTCGTAACTGGCAATACCATTACGCTCTATGCACTGCTGCTTGGTGCCCGCAGTACCACGGTAGGCTTGCTAA
GCGCGTGCATGCACTTTTCCTTCTTTGCACTCCCTTTAGGAAAACTTGTGTGCCGACGTTTTGGCGTCATTAAAACCTTT
GCGTACACCTGGATCGCCCGCAATACTAGTTTGCTTCCAATGCTCGCAATCCCTCACCTTTATGCACAAGACTATACGGC
ACTTGCACTGTATGTGCTTATTTTTTCCGTCGCACTGTTTAACTTTTTTCGTGGTATGGGAATGATCGCGAACAATCCGG
TCATCACCATGCTCGCACCAGGCAAACATCGCAGCTCATACATCGTACGCATCTCGCTTGCGAACAACAGTGCCATACTC
ATTGCCACGCTTTTACTCTCCGGGGCACTGAGCGTTAACGCTTCACTCACAACCTATCACTTTGCAACTGCACTCGGCAT
CGCACTAGGTTTTTTTGCTTCGTTTCTCCTTTTCACATTACCTACCGTCGAGTCATGCGAACATGTGCAGCACACTTCCC
CGGAGACCCCACGGACCTCACCGCGCTCCGGGTACACCACGATACTCCGTGCTCTGAAAGAGAAAAACTTTCGCACCTTT
ACGTTCGCTTTTTTTGTCAGCAGCTTTGCCACAGGTACAGTACGCCCCTTCGTTGTCGTATTCGCAAAGGACGTATACCA
CACTCCAGATAGCTTTATCACTATCCTCACCGTATGTGCATCCGGCGGTGCACTCATCGTCGGTTTTATAATGAGTTTAG
CTATCGATCGCATTGGGGCAAAGCCAATGTACATTATCTCCTCAGTTTTAAGTGTACTCACCCTCATCCCTGCGCTTGGT
ACGCCAGGACTCCATTCCTCTTTCCTTTCAATTGCTTTTTTATGCCTGTTCTGTGCAACTACCAGCATGGGATTTACCGG
ACAAGATAATGCAGCGCAGTCCTATTTTTTTGTCCTCGTTCCTGAGGATGCTTTAATAGATGTAAGTGTCCTGTACTATC
TTATTTTGGGCATCACTGGTGGAGCCGGATCGGTGATTGGCGGCGTGGTATTAGACTTCTGCCATCTCTCAGGATACTCC
AGTTTGCAGGCATATCGTATCTTTTTTACAGGAGTCAGCGCGATTATGATAATCGGCATCGCGCTTCAGACACAGCTGCG
CAACCTGGGTGGATACCGTGTATTGCGAACACTCGCAACGCTTTGCTCTCCAAAAGATCTGCGTACTCTCAGCCTCCTAC
ATAAACTCGACTTTAACGAAAATTTAGAAACCGAGCAGCATATCGTACAAGAACTTAGTACCATCGCCTCTCCCATCTCT
GCCGAACAACTGGGCACCTACGTGCAATCGCCACGTTTCAGTATCCGCGCAAGCGCATTGCAAGCACTGGAAACGATTCC
CTCGCTGAGTACACACAACCGTAATCTTTTGCTGCGAGAATTGCGCGAGGGAACATTCACTACTGCCGCACAGGCGGCAC
GCATCCTTGGCATTCATATGGTCCAGCAAGCAATTCCAATCCTGCGCGAAGCGCTCCATAGCGAGGATTACCTGCTCGTC
GGAGAAGCGCTTGTAGCGTTAGCACGCACACACGATGACGAAAGTCATTTCCTTATTGGGCATGTGCTGGCGCGCACGCA
AAATCCCTTTGTCGTGCTGCGTGGCCTGCAAGCGCTTGAGATGCTCAATTCAGTCCACGCGCTACCACCACTGTTTGAGA
TTTTGCGCACAACGTGCAAAAATACACAAACGCACACAGAAGCATTACTGACTCTATCGGTCTTGATGGGAATACAAAAT
GAATTCTACTTTCTATTTGAGCGCTACCGTACCGGTCATACAACCGTACAAGCGCTAGTACGAGAAAAACTAGAAGAAAG
TTTTGCTATCAGCAGGGTCACTGACGCGACACTTGAGAAAACACTGGAACGCTTTACGGCCGACGCACGCGCGGGCACCC
ACGTGGTCATGTGGGTACTGGCACGCGCAGGAGAAGACCTAGGGACAAAAACAGCACTCCTGCTGAGTCTTACGTTGGAG
AATCCCCTGTGCGCGCGAGAGGCTTTTCGCCTTCTGATAGGTACATGGACGGCCACCTTGTTTAGAAAACCCGCACTCAT
GTGCTCTTAG

Upstream 100 bases:

>100_bases
TCCCCCTCACCTATTTCTCCTCTGTAGAGCCTTTCCTCCGTCCTTAAACTGAACACCAGTTAGTGGACCAGATTACGCCG
CATCAGTACAATCGCGCGCA

Downstream 100 bases:

>100_bases
CGCTCAGACGGCCCGGTGCGCACAACACGCCGCAGGACGTGATCGACCGTGACTATCCCCCCTAAAACCGAAATCGCACG
GTAGAAAGCGTTTGCCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 749; Mature: 748

Protein sequence:

>749_residues
MSGEYQSFTLKRARRVYDQYNVINSLSFALVTGNTITLYALLLGARSTTVGLLSACMHFSFFALPLGKLVCRRFGVIKTF
AYTWIARNTSLLPMLAIPHLYAQDYTALALYVLIFSVALFNFFRGMGMIANNPVITMLAPGKHRSSYIVRISLANNSAIL
IATLLLSGALSVNASLTTYHFATALGIALGFFASFLLFTLPTVESCEHVQHTSPETPRTSPRSGYTTILRALKEKNFRTF
TFAFFVSSFATGTVRPFVVVFAKDVYHTPDSFITILTVCASGGALIVGFIMSLAIDRIGAKPMYIISSVLSVLTLIPALG
TPGLHSSFLSIAFLCLFCATTSMGFTGQDNAAQSYFFVLVPEDALIDVSVLYYLILGITGGAGSVIGGVVLDFCHLSGYS
SLQAYRIFFTGVSAIMIIGIALQTQLRNLGGYRVLRTLATLCSPKDLRTLSLLHKLDFNENLETEQHIVQELSTIASPIS
AEQLGTYVQSPRFSIRASALQALETIPSLSTHNRNLLLRELREGTFTTAAQAARILGIHMVQQAIPILREALHSEDYLLV
GEALVALARTHDDESHFLIGHVLARTQNPFVVLRGLQALEMLNSVHALPPLFEILRTTCKNTQTHTEALLTLSVLMGIQN
EFYFLFERYRTGHTTVQALVREKLEESFAISRVTDATLEKTLERFTADARAGTHVVMWVLARAGEDLGTKTALLLSLTLE
NPLCAREAFRLLIGTWTATLFRKPALMCS

Sequences:

>Translated_749_residues
MSGEYQSFTLKRARRVYDQYNVINSLSFALVTGNTITLYALLLGARSTTVGLLSACMHFSFFALPLGKLVCRRFGVIKTF
AYTWIARNTSLLPMLAIPHLYAQDYTALALYVLIFSVALFNFFRGMGMIANNPVITMLAPGKHRSSYIVRISLANNSAIL
IATLLLSGALSVNASLTTYHFATALGIALGFFASFLLFTLPTVESCEHVQHTSPETPRTSPRSGYTTILRALKEKNFRTF
TFAFFVSSFATGTVRPFVVVFAKDVYHTPDSFITILTVCASGGALIVGFIMSLAIDRIGAKPMYIISSVLSVLTLIPALG
TPGLHSSFLSIAFLCLFCATTSMGFTGQDNAAQSYFFVLVPEDALIDVSVLYYLILGITGGAGSVIGGVVLDFCHLSGYS
SLQAYRIFFTGVSAIMIIGIALQTQLRNLGGYRVLRTLATLCSPKDLRTLSLLHKLDFNENLETEQHIVQELSTIASPIS
AEQLGTYVQSPRFSIRASALQALETIPSLSTHNRNLLLRELREGTFTTAAQAARILGIHMVQQAIPILREALHSEDYLLV
GEALVALARTHDDESHFLIGHVLARTQNPFVVLRGLQALEMLNSVHALPPLFEILRTTCKNTQTHTEALLTLSVLMGIQN
EFYFLFERYRTGHTTVQALVREKLEESFAISRVTDATLEKTLERFTADARAGTHVVMWVLARAGEDLGTKTALLLSLTLE
NPLCAREAFRLLIGTWTATLFRKPALMCS
>Mature_748_residues
SGEYQSFTLKRARRVYDQYNVINSLSFALVTGNTITLYALLLGARSTTVGLLSACMHFSFFALPLGKLVCRRFGVIKTFA
YTWIARNTSLLPMLAIPHLYAQDYTALALYVLIFSVALFNFFRGMGMIANNPVITMLAPGKHRSSYIVRISLANNSAILI
ATLLLSGALSVNASLTTYHFATALGIALGFFASFLLFTLPTVESCEHVQHTSPETPRTSPRSGYTTILRALKEKNFRTFT
FAFFVSSFATGTVRPFVVVFAKDVYHTPDSFITILTVCASGGALIVGFIMSLAIDRIGAKPMYIISSVLSVLTLIPALGT
PGLHSSFLSIAFLCLFCATTSMGFTGQDNAAQSYFFVLVPEDALIDVSVLYYLILGITGGAGSVIGGVVLDFCHLSGYSS
LQAYRIFFTGVSAIMIIGIALQTQLRNLGGYRVLRTLATLCSPKDLRTLSLLHKLDFNENLETEQHIVQELSTIASPISA
EQLGTYVQSPRFSIRASALQALETIPSLSTHNRNLLLRELREGTFTTAAQAARILGIHMVQQAIPILREALHSEDYLLVG
EALVALARTHDDESHFLIGHVLARTQNPFVVLRGLQALEMLNSVHALPPLFEILRTTCKNTQTHTEALLTLSVLMGIQNE
FYFLFERYRTGHTTVQALVREKLEESFAISRVTDATLEKTLERFTADARAGTHVVMWVLARAGEDLGTKTALLLSLTLEN
PLCAREAFRLLIGTWTATLFRKPALMCS

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82282; Mature: 82151

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGEYQSFTLKRARRVYDQYNVINSLSFALVTGNTITLYALLLGARSTTVGLLSACMHFS
CCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHH
FFALPLGKLVCRRFGVIKTFAYTWIARNTSLLPMLAIPHLYAQDYTALALYVLIFSVALF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFFRGMGMIANNPVITMLAPGKHRSSYIVRISLANNSAILIATLLLSGALSVNASLTTYH
HHHHCCCCEECCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHH
FATALGIALGFFASFLLFTLPTVESCEHVQHTSPETPRTSPRSGYTTILRALKEKNFRTF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCH
TFAFFVSSFATGTVRPFVVVFAKDVYHTPDSFITILTVCASGGALIVGFIMSLAIDRIGA
HHHHHHHHHCCCCCCHHHHEEEHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
KPMYIISSVLSVLTLIPALGTPGLHSSFLSIAFLCLFCATTSMGFTGQDNAAQSYFFVLV
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
PEDALIDVSVLYYLILGITGGAGSVIGGVVLDFCHLSGYSSLQAYRIFFTGVSAIMIIGI
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
ALQTQLRNLGGYRVLRTLATLCSPKDLRTLSLLHKLDFNENLETEQHIVQELSTIASPIS
HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
AEQLGTYVQSPRFSIRASALQALETIPSLSTHNRNLLLRELREGTFTTAAQAARILGIHM
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
VQQAIPILREALHSEDYLLVGEALVALARTHDDESHFLIGHVLARTQNPFVVLRGLQALE
HHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
MLNSVHALPPLFEILRTTCKNTQTHTEALLTLSVLMGIQNEFYFLFERYRTGHTTVQALV
HHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHH
REKLEESFAISRVTDATLEKTLERFTADARAGTHVVMWVLARAGEDLGTKTALLLSLTLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHEEEEEEECC
NPLCAREAFRLLIGTWTATLFRKPALMCS
CCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SGEYQSFTLKRARRVYDQYNVINSLSFALVTGNTITLYALLLGARSTTVGLLSACMHFS
CCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHH
FFALPLGKLVCRRFGVIKTFAYTWIARNTSLLPMLAIPHLYAQDYTALALYVLIFSVALF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFFRGMGMIANNPVITMLAPGKHRSSYIVRISLANNSAILIATLLLSGALSVNASLTTYH
HHHHCCCCEECCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHH
FATALGIALGFFASFLLFTLPTVESCEHVQHTSPETPRTSPRSGYTTILRALKEKNFRTF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCH
TFAFFVSSFATGTVRPFVVVFAKDVYHTPDSFITILTVCASGGALIVGFIMSLAIDRIGA
HHHHHHHHHCCCCCCHHHHEEEHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
KPMYIISSVLSVLTLIPALGTPGLHSSFLSIAFLCLFCATTSMGFTGQDNAAQSYFFVLV
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
PEDALIDVSVLYYLILGITGGAGSVIGGVVLDFCHLSGYSSLQAYRIFFTGVSAIMIIGI
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
ALQTQLRNLGGYRVLRTLATLCSPKDLRTLSLLHKLDFNENLETEQHIVQELSTIASPIS
HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
AEQLGTYVQSPRFSIRASALQALETIPSLSTHNRNLLLRELREGTFTTAAQAARILGIHM
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
VQQAIPILREALHSEDYLLVGEALVALARTHDDESHFLIGHVLARTQNPFVVLRGLQALE
HHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
MLNSVHALPPLFEILRTTCKNTQTHTEALLTLSVLMGIQNEFYFLFERYRTGHTTVQALV
HHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHH
REKLEESFAISRVTDATLEKTLERFTADARAGTHVVMWVLARAGEDLGTKTALLLSLTLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHEEEEEEECC
NPLCAREAFRLLIGTWTATLFRKPALMCS
CCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA