| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025991
Identifier: 189025991
GI number: 189025991
Start: 832052
End: 832933
Strand: Direct
Name: 189025991
Synonym: TPASS_0766
Alternate gene names: NA
Gene position: 832052-832933 (Clockwise)
Preceding gene: 189025989
Following gene: 189025992
Centisome position: 73.02
GC content: 57.6
Gene sequence:
>882_bases ATGACACCTACCTATCACCCGTACCCGGGCGACAATCGCCCCTTTCTATACGCCGCGCTTCAGCGACGTGAGCACCTGTC CCTTATCCGGTACCGCGCAGAGCACGCGCAGGACCTGGCACCCTTGAGAGCGTTCTTGGCGCGCATCGAGGCGCACGCAA CCGTCATTGGTGCACGCACGCGTGGGGACACCCTTTTTATCCTTGCCGCATCGATGCCGTCTGATGCACTGCGCGACGAA AAACACGCATATGTGCGCACAATCTCCTGGGAACAGGCTCCTCAGATACTTGAGACGTTGGAGCGTCCGCCGCTCCCTCC TTATTGCCCGCCCGTTCCTACTTCCTGTTCTTCTTCGCGTCTTATTCCCGACGTGCCGCACAACACCAGGTCACACGCGC AGGAGAGTTCCTACACCTCTCGGCATGCGCTTTTGACGCTGCTCATTGAGTGGCGCGCGCTCATGGTAGAGATGGACTAT TCAGTGAGAGCGCACAGGGTGCAGCGTAGTTCTGCTCCGTTGCATGAAAGACACGGCACTCTTCCCTCTGACGTACTGCT CTTCCAAACACAGGGGGAGGTCTGCGCTCTCTGTGCCTTTCAGTTGCAGCACGTGCGCGCAGTAGGCGGGCAGCGTCATC TTATCATTCATGAAGCGGCAGGAGGCGGGAACATTGCATGCGAACGCATTTTCTCTCTCAAGGAGATTGATTTTGCCACT GCAAAATTTACTGAGCGTATCCGTCGCGGGCTGTACCAGGTTGCTGTGCATACGGCACACGCAGACTTTACGGTCAACCT CATCGTTCCCTCACTCAGAGAGCAGGGCGGCGCCTACTCCCTTGCAGAGTCTTCTGCCTTTCACAGGAGGGTAAGCGCGT AA
Upstream 100 bases:
>100_bases TTAGCGACGTCCGCTGGGGCGGTATGCACGGTGCTGCAAAAAAACACACGCGCGCGGCTATTGCTTACCCTCATGCGCGC GTTCACCGAAACTTCACCTA
Downstream 100 bases:
>100_bases ACTGCAGATTACGCAAAACTAGCGGTTCTAGCCCGGAGGGGTGAAGCGCGCCGTGTGCATCGGCACGACCCCGCCAGAGA AGGCGGGCGCCCGTCTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTPTYHPYPGDNRPFLYAALQRREHLSLIRYRAEHAQDLAPLRAFLARIEAHATVIGARTRGDTLFILAASMPSDALRDE KHAYVRTISWEQAPQILETLERPPLPPYCPPVPTSCSSSRLIPDVPHNTRSHAQESSYTSRHALLTLLIEWRALMVEMDY SVRAHRVQRSSAPLHERHGTLPSDVLLFQTQGEVCALCAFQLQHVRAVGGQRHLIIHEAAGGGNIACERIFSLKEIDFAT AKFTERIRRGLYQVAVHTAHADFTVNLIVPSLREQGGAYSLAESSAFHRRVSA
Sequences:
>Translated_293_residues MTPTYHPYPGDNRPFLYAALQRREHLSLIRYRAEHAQDLAPLRAFLARIEAHATVIGARTRGDTLFILAASMPSDALRDE KHAYVRTISWEQAPQILETLERPPLPPYCPPVPTSCSSSRLIPDVPHNTRSHAQESSYTSRHALLTLLIEWRALMVEMDY SVRAHRVQRSSAPLHERHGTLPSDVLLFQTQGEVCALCAFQLQHVRAVGGQRHLIIHEAAGGGNIACERIFSLKEIDFAT AKFTERIRRGLYQVAVHTAHADFTVNLIVPSLREQGGAYSLAESSAFHRRVSA >Mature_292_residues TPTYHPYPGDNRPFLYAALQRREHLSLIRYRAEHAQDLAPLRAFLARIEAHATVIGARTRGDTLFILAASMPSDALRDEK HAYVRTISWEQAPQILETLERPPLPPYCPPVPTSCSSSRLIPDVPHNTRSHAQESSYTSRHALLTLLIEWRALMVEMDYS VRAHRVQRSSAPLHERHGTLPSDVLLFQTQGEVCALCAFQLQHVRAVGGQRHLIIHEAAGGGNIACERIFSLKEIDFATA KFTERIRRGLYQVAVHTAHADFTVNLIVPSLREQGGAYSLAESSAFHRRVSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y766_TREPA (O83747)
Other databases:
- EMBL: AE000520 - PIR: C71283 - RefSeq: NP_219203.1 - ProteinModelPortal: O83747 - IntAct: O83747 - GeneID: 2611377 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0766 - NMPDR: fig|243276.1.peg.762 - TIGR: TP_0766 - HOGENOM: HBG251060 - OMA: LACVEAR - ProtClustDB: CLSK218856 - BioCyc: TPAL243276:TP_0766-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32878; Mature: 32747
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTYHPYPGDNRPFLYAALQRREHLSLIRYRAEHAQDLAPLRAFLARIEAHATVIGART CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC RGDTLFILAASMPSDALRDEKHAYVRTISWEQAPQILETLERPPLPPYCPPVPTSCSSSR CCCEEEEEEECCCCHHHHCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC LIPDVPHNTRSHAQESSYTSRHALLTLLIEWRALMVEMDYSVRAHRVQRSSAPLHERHGT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCC LPSDVLLFQTQGEVCALCAFQLQHVRAVGGQRHLIIHEAAGGGNIACERIFSLKEIDFAT CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH AKFTERIRRGLYQVAVHTAHADFTVNLIVPSLREQGGAYSLAESSAFHRRVSA HHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCCCEEHHHHHHHHHHCCC >Mature Secondary Structure TPTYHPYPGDNRPFLYAALQRREHLSLIRYRAEHAQDLAPLRAFLARIEAHATVIGART CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC RGDTLFILAASMPSDALRDEKHAYVRTISWEQAPQILETLERPPLPPYCPPVPTSCSSSR CCCEEEEEEECCCCHHHHCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC LIPDVPHNTRSHAQESSYTSRHALLTLLIEWRALMVEMDYSVRAHRVQRSSAPLHERHGT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCC LPSDVLLFQTQGEVCALCAFQLQHVRAVGGQRHLIIHEAAGGGNIACERIFSLKEIDFAT CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH AKFTERIRRGLYQVAVHTAHADFTVNLIVPSLREQGGAYSLAESSAFHRRVSA HHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCCCEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876