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The map label for this gene is fliM [H]

Identifier: 189025946

GI number: 189025946

Start: 789908

End: 790942

Strand: Reverse

Name: fliM [H]

Synonym: TPASS_0721

Alternate gene names: 189025946

Gene position: 790942-789908 (Counterclockwise)

Preceding gene: 189025947

Following gene: 189025945

Centisome position: 69.41

GC content: 51.21

Gene sequence:

>1035_bases
ATGACAGAGGTATTATCGCAGGACGAAATAGATCAGCTGCTAACGGCTATCAGTTCTGGGGATGCAAGTATTGAAGATGC
GCGCCCTATCAGCGACACCCGTAAGATTAAGCTCTATGATTTTAGGCGCCCAGATAAGTTTTCAAAGGAGCAGATGCGTA
CACTGTCGTTGATGCATGAGACTTTTGCGCGGTTGACTACTACCTCGCTGTCGGCGCAGCTGCGCAGTATGGTGCACGTG
CACGTTGCGTCGGTAGATCAGCTCACGTACGAGGAGTTTATCCGTTCTATTCCCACGCCTTCTACGCTTGCGGTGATCAC
TATGGATCCGCTCAAAGGGAACGCAGTGCTTGAGGTGGATCCCTCCATTACTTTTTCTATCATTGACCGCCTCTTTGGAG
GAACAGGACAGGCAGCCAAGGTGCAGCGGGATTTGACTGATATTGAAAATTCAGTAATGGAAGGGGTCATCGTCCGTATT
CTGGCGAATGTGCGTGAATCCTGGACGCAGGTTATCGATCTGCGTCCGCGCCTGGGTCAAATTGAAACGAACCCGCAATT
CGCGCAGATCGTCCCTCCCTCAGAGATGGTGGTGTTGGTGACGCTCGAGACAAAGGTAGGTGAGGAAGAGGGGATGATGA
ACTTTTGCATTCCGTACATCACCATAGAACCTATCATTTCTAAGTTGTCGAGTCAGTTTTGGTTTTCTTCGGTGCGCAGG
AGTTCTACCACGCAGTACATGGGGGTTCTGCGCGACAAGCTATCCACGGTGGATATGGATGTGGTGGCAGAAGTTGGGTC
GCTCCGCCTTTCAGTGCGCGATATCCTTGGGCTCCGGGTGGGGGATATCATCCGGTTGCACGACACCCATGTGGGCGATC
CTTTTGTGCTCAGTATTGGGAACCGCAAGAAGTTTTTGTGTCAGCCTGGGGTGGTGGGAAAAAAGATTGCCGCGCAGATT
TTGGAACGAATAGAAAGTACCTCCCAAGAGGATTTTGAGGAATTATCCGCGGACGAGGAGGAATTGTATGAGTGA

Upstream 100 bases:

>100_bases
TGAGATTAACGACAATGTACTTTCTCGGTCAAAAGTCAAGGACATTCGTTTCACGCAGTTTGACGTACTTAAGCCCTAAC
GGAAAGATCACGGGGATGCT

Downstream 100 bases:

>100_bases
CGGCTCTATTTCTCAGGCTGAAATCGATGCCCTGCTTTCAGGTGTTGAGATGGGAGCCGGCGACTCCCCCGCTGCGGGCG
CGTCTTTCTCCGGTGGGGGG

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTEVLSQDEIDQLLTAISSGDASIEDARPISDTRKIKLYDFRRPDKFSKEQMRTLSLMHETFARLTTTSLSAQLRSMVHV
HVASVDQLTYEEFIRSIPTPSTLAVITMDPLKGNAVLEVDPSITFSIIDRLFGGTGQAAKVQRDLTDIENSVMEGVIVRI
LANVRESWTQVIDLRPRLGQIETNPQFAQIVPPSEMVVLVTLETKVGEEEGMMNFCIPYITIEPIISKLSSQFWFSSVRR
SSTTQYMGVLRDKLSTVDMDVVAEVGSLRLSVRDILGLRVGDIIRLHDTHVGDPFVLSIGNRKKFLCQPGVVGKKIAAQI
LERIESTSQEDFEELSADEEELYE

Sequences:

>Translated_344_residues
MTEVLSQDEIDQLLTAISSGDASIEDARPISDTRKIKLYDFRRPDKFSKEQMRTLSLMHETFARLTTTSLSAQLRSMVHV
HVASVDQLTYEEFIRSIPTPSTLAVITMDPLKGNAVLEVDPSITFSIIDRLFGGTGQAAKVQRDLTDIENSVMEGVIVRI
LANVRESWTQVIDLRPRLGQIETNPQFAQIVPPSEMVVLVTLETKVGEEEGMMNFCIPYITIEPIISKLSSQFWFSSVRR
SSTTQYMGVLRDKLSTVDMDVVAEVGSLRLSVRDILGLRVGDIIRLHDTHVGDPFVLSIGNRKKFLCQPGVVGKKIAAQI
LERIESTSQEDFEELSADEEELYE
>Mature_343_residues
TEVLSQDEIDQLLTAISSGDASIEDARPISDTRKIKLYDFRRPDKFSKEQMRTLSLMHETFARLTTTSLSAQLRSMVHVH
VASVDQLTYEEFIRSIPTPSTLAVITMDPLKGNAVLEVDPSITFSIIDRLFGGTGQAAKVQRDLTDIENSVMEGVIVRIL
ANVRESWTQVIDLRPRLGQIETNPQFAQIVPPSEMVVLVTLETKVGEEEGMMNFCIPYITIEPIISKLSSQFWFSSVRRS
STTQYMGVLRDKLSTVDMDVVAEVGSLRLSVRDILGLRVGDIIRLHDTHVGDPFVLSIGNRKKFLCQPGVVGKKIAAQIL
ERIESTSQEDFEELSADEEELYE

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=286, Percent_Identity=27.972027972028, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 38581; Mature: 38450

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEVLSQDEIDQLLTAISSGDASIEDARPISDTRKIKLYDFRRPDKFSKEQMRTLSLMHE
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
TFARLTTTSLSAQLRSMVHVHVASVDQLTYEEFIRSIPTPSTLAVITMDPLKGNAVLEVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEC
PSITFSIIDRLFGGTGQAAKVQRDLTDIENSVMEGVIVRILANVRESWTQVIDLRPRLGQ
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IETNPQFAQIVPPSEMVVLVTLETKVGEEEGMMNFCIPYITIEPIISKLSSQFWFSSVRR
CCCCCCEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSTTQYMGVLRDKLSTVDMDVVAEVGSLRLSVRDILGLRVGDIIRLHDTHVGDPFVLSIG
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEC
NRKKFLCQPGVVGKKIAAQILERIESTSQEDFEELSADEEELYE
CCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCC
>Mature Secondary Structure 
TEVLSQDEIDQLLTAISSGDASIEDARPISDTRKIKLYDFRRPDKFSKEQMRTLSLMHE
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
TFARLTTTSLSAQLRSMVHVHVASVDQLTYEEFIRSIPTPSTLAVITMDPLKGNAVLEVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEC
PSITFSIIDRLFGGTGQAAKVQRDLTDIENSVMEGVIVRILANVRESWTQVIDLRPRLGQ
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IETNPQFAQIVPPSEMVVLVTLETKVGEEEGMMNFCIPYITIEPIISKLSSQFWFSSVRR
CCCCCCEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSTTQYMGVLRDKLSTVDMDVVAEVGSLRLSVRDILGLRVGDIIRLHDTHVGDPFVLSIG
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEC
NRKKFLCQPGVVGKKIAAQILERIESTSQEDFEELSADEEELYE
CCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8755894; 9665876; 8529894 [H]